Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq486 109 7e-19 seq44 96.9 5e-15 >seq486 Length=7659 Score = 109 bits (120), Expect = 7e-19 Identities = 197/279 (71%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 181347 TCGCGGTCAAGCTGTTCCTTCACCTGATCGAAGTGATTGTTGTAGATGTGGGTATCACC- 181405 ||||| || ||||| |||||||| |||| ||| ||| |||||||||| | ||| || Sbjct 2645 TCGCGCTCGAGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAGATGTGCGCATCGCCG 2704 Query 181406 AAGGT-TGC-CGATCAGTTCCCCGACTTCAAGACCACATTCCAGCGCGATCAGATGTGTC 181463 ||||| ||| ||| ||| |||| ||| | | || || ||||||||| || ||| Sbjct 2705 AAGGTGTGCACGA--AGTCCCCC-ACTCCCAATCCCGTCACCTGCGCGATCATGTGCGTC 2761 Query 181464 AGGAGCGCGTAAGAGGCGATGTTGAAGGGAAGCCCCAAGAAGACGTCCACGGACCGCTGA 181523 |||| |||||| |||||||||||| || | || | ||| | |||| | || ||||| Sbjct 2762 AGGATGGCGTAACTGGCGATGTTGAACGGCACGCCGAGGAACAGGTCCGCCGAGCGCTGG 2821 Query 181524 TTCCAAAGGCAGGACAGTTTGTCATTGCGAACATAGAACTGGAATCCGTA-GTGGCACGG 181582 | ||||| ||| ||| | | || ||||||||||| | | | ||||||||| Sbjct 2822 TAGAGCTGGCAGCTCAGCTTGCCGCCGGCGACGTAGAACTGGAA-CAGCAGGTGGCACGG 2880 Query 181583 CGGCAAAGCCATTAGATCGACCGCGCCGACATTCCAAGC 181621 ||||| ||||| | |||| || | || ||||| || Sbjct 2881 CGGCAGGGCCATCTGGTCGAGTTCGGCCACGTTCCACGC 2919 >seq44 Length=32007 Score = 96.9 bits (106), Expect = 5e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 181464 AGGAGCGCGTAAGAGGCGATGTTGAAGGGAAGCCCCAAGAAGACGTCCACGGACCGCTGA 181523 || ||||| || |||||||||||||| || | |||||||| || || |||| |||||| Sbjct 27858 AGCAGCGCATAGGAGGCGATGTTGAACGGCACGCCCAAGAACACATCAGCGGAGCGCTGA 27799 Query 181524 TTCCAAAGGCAGGACAGTTTGTCATTGCGAACATAGAACTGGAATCCGTAGTGGCACGGC 181583 | ||||||| || ||| | | |||||||||||||| |||| || ||| Sbjct 27798 TAGAGCTGGCAGGAAAGCTTGCCGTCCGCCACATAGAACTGGAACAGACAGTGACAGGGC 27739 Query 181584 GGCAAAGCCATTAGATCGACCGCGCCGACATTCCAAGCCGAGACCATATGACGACGGCTG 181643 |||| ||||| ||| || | | |||||||| ||||| || || | || ||| | Sbjct 27738 GGCAGCGCCATATTATCTACGTCCGCCACATTCCAGGCCGACACGATCAGCCGCCGGGAG 27679 Query 181644 AGAGGATCATTCTTGA--TGGTCACGATGACGTCAATGATCTGATCGAT 181690 |||| ||||| || |||||| || | || |||||||||| || Sbjct 27678 TCTGGATTATTCTCGATCTGGTCA--ATCAGGTTTTTGATCTGATCAAT 27632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661216559267160