Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq3519 132 2e-26 seq11188 122 3e-23 seq45 107 6e-19 seq6164 96.9 1e-15 seq2710 96.9 1e-15 seq912 96.9 1e-15 >seq3519 Length=1701 Score = 132 bits (146), Expect = 2e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 39514 GAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACCGCTCGAAGAT 39573 ||| |||| ||| | |||||||||||| || || || |||||||||||||||||||| | Sbjct 450 GAAATCGACGTCAAAGTCGGGCATGGACACCCGTTCCGGGTTCAGGAACCGCTCGAACAG 509 Query 39574 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39633 || ||| | |||||||||||||| ||| || ||||| || |||| || || Sbjct 510 CAGGTCGTACTCCAGTGGGTCCAGGTCGGTAATCAGCAGCGCGTAGGCCACCAGGGAACC 569 Query 39634 AGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCCCAGCCGATGAA 39693 || | || || || || || || ||| |||||||| | ||| ||||| ||| || Sbjct 570 GGCACCGGAACCCCGGCCGGGCCCTACCGGTACACCGTTGTTCTTGGCCCACTTGATAAA 629 Query 39694 GTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCG 39751 ||| |||| |||||||| ||||| |||||||| |||| ||||| | |||| Sbjct 630 GTCCATAACGATCAGGAAGTAGCCTGGGAAGCCCATCTGAATGATGATGTCCAGCTCG 687 >seq11188 Length=750 Score = 122 bits (134), Expect = 3e-23 Identities = 217/317 (68%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 39442 GATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39501 |||||| |||||| ||| |||||| || | || || |||||||| ||||| || Sbjct 229 GATCTGCGCGACCCGGTCATCGCCGTAGCGATCCCTCACATAGCGGATCACCTCGCCGCG 288 Query 39502 GCGACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAA 39561 ||| | | |||||||| ||| | ||| ||||| || || || || ||||| ||||| Sbjct 289 CCGATCCTGACAGAAGTCGACGTCGAAGTCTGGCATCGACACACGTTCGGGGTTGAGGAA 348 Query 39562 CCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGC 39621 ||||| || | | |||| | | || || || ||||| ||| ||| || | || Sbjct 349 ACGCTCAAACAGCAACCCGAACCGAAGCGGATCAAGATCGGTAATCGTGAGCGCCCAGGC 408 Query 39622 GGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGC 39681 | ||||||||||||| | || || ||||| || || ||| | | | | ||| || Sbjct 409 GACCAGCGAGCCAGCGCCTGAACCCCGCCCTGGTCCCACCGGAATATCCTGAGACTTTGC 468 Query 39682 CCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCAT 39741 ||| ||| ||||| | |||| ||||| || || |||||||||| | ||| || Sbjct 469 CCACTGGATAAAGTCCGAAACGATCAGGAAATAACCAGGAAACCCCATCTTTTCGATGAT 528 Query 39742 GTCGATCTCGTAGTCGA 39758 | | | |||||| |||| Sbjct 529 GCCCAGCTCGTAATCGA 545 >seq45 Length=31681 Score = 107 bits (118), Expect = 6e-19 Identities = 190/276 (69%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 39442 GATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39501 |||||| || |||| |||| ||| || || || || |||||||| || | || Sbjct 23772 GATCTGAGCCACCTGGTCGTGGCCATAGCGATCCTGCACATAGCGGATCACCTCATCGCG 23831 Query 39502 GCGACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAA 39561 ||| | | |||||||||||| | ||| ||||| || || ||||||||||||| || Sbjct 23832 GCGGTCCTGACAGAAGTCGATGTCAAAGTCAGGCATCGACACACGCTCAGGGTTCAAAAA 23891 Query 39562 CCGCTCGAAGATGAGCCCGTGA---GGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTA 39618 |||||| || | ||| || | | | |||||||| || ||||| || | | Sbjct 23892 CCGCTCAAACAGGAG---GTTAAATCGCAGCGGGTCCAGATCTGTGATGGTCAGCACCCA 23948 Query 39619 CGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTT 39678 ||| ||| ||| || || | || ||||| || || || ||| | | ||| ||||| Sbjct 23949 GGCGACCACCGACCCGGCGCCTGACCCACGGCCCGGACCCACCGGGATATCGTGATCCTT 24008 Query 39679 CGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTA 39714 ||||| |||||||||||| |||| |||||||| Sbjct 24009 GGCCCATTTGATGAAGTCGGCAACGATCAGGAAGTA 24044 >seq6164 Length=1154 Score = 96.9 bits (106), Expect = 1e-15 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 40561 CGCGACGTACGCCTCGATCCCGATGATGGGCTTGACCCCAGCGGCCTGCCCCTGCGTGAA 40620 |||||||||||||||| |||| ||| ||||| || || |||| || |||||||| | Sbjct 373 CGCGACGTACGCCTCGCAGCCGAGGATCGGCTTCACGCCCTTGGCCCGCGCCTGCGTGTA 314 Query 40621 GAA-GTCGTACGCACCGTGCAGGTTGCCGTGGTCGGTCATCGCGAGGGCCTTCATGCCCT 40679 | | | | | ||| ||| |||||||||||||||||||| |||| || | |||||| Sbjct 313 GTACGACAT-CGCGCCGAACAGGTTGCCGTGGTCGGTCACCGCGCACGCGTCCATGCCGA 255 Query 40680 GCGCCTTGGC--CTCGGCGAACATGTCCTTCAGTCGAGCCGCC-CCGTCGAGAAGGCTGT 40736 | || ||| | ||| || | | || || | ||| |||||||| || || Sbjct 254 G---CTCGGCGACGCGGTTGACCAGCCGGTCGATCCGGTTGCCGCCGTCGAGCAGCGAGT 198 Query 40737 ACTCGGAGTGGACATGCAGGTGGACGAAGTCCTT 40770 |||| || || | ||||||||||||||| |||| Sbjct 197 ACTCCGAATGCAGGTGCAGGTGGACGAAGCCCTT 164 >seq2710 Length=2059 Score = 96.9 bits (106), Expect = 1e-15 Identities = 175/256 (68%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 39515 AAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACCGCTCGAAGATG 39574 ||||||||||| | ||||||||| || || ||||||||||||||||||||||| || | Sbjct 2011 AAGTCGATGTCGAAGTCGGGCATCGATACCCGCTCAGGGTTCAGGAACCGCTCAAACAGC 1952 Query 39575 AGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCA 39634 ||| | | | || || ||||| || ||| || || || || | ||||| || Sbjct 1951 AGCGAATATCGCAGCGGATCAAGGTCAGTAATCGTTAGCGCATAAGCCACAAGCGACCCC 1892 Query 39635 GCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCCCAGCCGATGAAG 39694 || | || || || ||||| || || | || | || || |||| ||| ||| Sbjct 1891 GCGCCCGACCCCCGGCCAGGCCCCACGGCGATGCCCTGATCTTTGCCCCACTGGATAAAG 1832 Query 39695 TCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCGTAG 39754 ||||| |||| ||||| || ||| || ||||| | ||| ||| | | ||| || Sbjct 1831 TCGGCAACGATCAGGAAATAGCCCGGAAAGCCCATGCCCTCGATGATGCCCAACTCAAAG 1772 Query 39755 TCGACCTGCGTTCGGT 39770 |||| | ||| | ||| Sbjct 1771 TCGAGCCGCGCTTGGT 1756 >seq912 Length=4712 Score = 96.9 bits (106), Expect = 1e-15 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 39442 GATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39501 |||||| | ||||||||| |||| || || || ||||| |||||||| || |||| Sbjct 194 GATCTGGCCCACCTTGTCGGTGCCATATTTGTCCTGAACGTAGCGGATCACCTCTTCACG 135 Query 39502 GCGACGGTCATC--GAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGG 39559 ||| | ||| |||||||||||| | ||| ||||| || || || || ||||| ||| Sbjct 134 GCG--GTCCATGCAGAAGTCGATGTCGAAGTCCGGCATAGAAACACGTTCGGGGTTGAGG 77 Query 39560 AACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTAC 39619 ||||| ||||| | ||| | | | ||||| ||||||||||| || || || Sbjct 76 AACCGTTCGAACAGAAGCTGATAGCGCAATGGGTCGAGGTCGGTGATGGTCAGCGCATAA 17 Query 39620 GCGGCCAGCGAGCCAG 39635 || ||| ||||||| Sbjct 16 GCCACCAAAGAGCCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160208456455550