Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028980.1 Length=62181 Score E Sequences producing significant alignments: (Bits) Value seq388 122 3e-23 seq34 93.3 2e-14 >seq388 Length=8708 Score = 122 bits (134), Expect = 3e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33057 CTACCGCGAAGTGGACGCCCGGGCGCTGTGGGAC-GCGATCATGCGCGGGACCTGGGACT 33115 ||||||| ||| | || || | |||||| || ||| ||||||||| ||||| || | Sbjct 1797 CTACCGCACTGTGCAGGCACGCGATCTGTGGAACCGCG-TCATGCGCGCGACCTATGATT 1739 Query 33116 GGGCGGAGCCTGGGGTGCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACT 33175 || || || || ||| | || |||||| |||||| | |||||||| | || Sbjct 1738 ATGCCGAACCCGGCGTGATCTTTATCGACCGGATCAATCAGGCCAACAACCTGAGCTATG 1679 Query 33176 GCGAGACCATCGCCGCCACCAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCT 33235 |||||||||||| || || |||||||| ||||| ||||| || |||||||| ||||||| Sbjct 1678 TCGAGACCATCGCGGCGACAAACCCCTGTGGTGAACAACCCCTGCCGCCCTATGGTGCCT 1619 Query 33236 GCTTGTTGGGCTCCTTCAACTTGG 33259 || || |||| || ||||| ||| Sbjct 1618 GCCTGCTGGGGTCGATCAACATGG 1595 Score = 89.7 bits (98), Expect = 2e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 33556 GCCAAGGTCAAGGGCTCCTTCCCGAAGTTCGACAAGGACAAGTACCT-GCAGG-GCCAGT 33613 ||||||| ||||| | |||||| ||||| ||||||||||| ||| | || Sbjct 1298 GCCAAGGAAAAGGGTGCGTTCCCGCTCTTCGATGCCGACAAGTACCTTGCATCCGGCAC- 1240 Query 33614 TCATCAAGACCCTCCGCGAGGACGTGCGGGACGCCATCGCCAAATACGGCATCCGCAACT 33673 ||| ||| | |||||||||||| ||||| ||| || |||||||||||||| Sbjct 1239 -CATGCAGATGATGGACGAGGACGTGCGCGACGCGATCCGAGAACACGGCATCCGCAACG 1181 Query 33674 CCCACCTCACTTCCATCGCCCCGACCGGGACCATCAGCCTGTGCGCCGACAACGTCAGCT 33733 | | ||||| || || || ||||| ||||| ||| || | ||| | |||||| | Sbjct 1180 CGCTGCTCACGTCGATTGCGCCGACGGGGACGATCTCGCTTTACGCTGGCAACGTGTCAT 1121 Query 33734 CCGGGATTGAGCCGGTGTTCGCCTA 33758 | ||||| |||||||| || ||||| Sbjct 1120 CGGGGATCGAGCCGGTTTTTGCCTA 1096 >seq34 Length=41571 Score = 93.3 bits (102), Expect = 2e-14 Identities = 138/189 (73%), Gaps = 5/189 (3%) Strand=Plus/Plus Query 33073 GCCCGGGCGCTGTGGGACGCGATCATGCGCGGGACCTGGGACTGGGCGGAGCCTGGGGTG 33132 |||||||| ||||||||| || ||| | |||| | || |||||||| || || Sbjct 34051 GCCCGGGCACTGTGGGACAAAATGATGGATGCCACCTACGCCTATGCGGAGCCCGGCGTC 34110 Query 33133 CTGTTCATCGA-CGCGATCAACC-GCATGAACAACCTCTGGTACTGCGAGACCATCGCCG 33190 | ||||| || ||| |||||| ||| ||||| ||| || ||||| || || || Sbjct 34111 ATTTTCATTGATCGC-ATCAACAAGCAA-AACAATCTCGCCTATTGCGAAACAATTCACG 34168 Query 33191 CCACCAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCT 33250 ||||||| ||||| || |||||||| ||||||||||| || ||||| | || || || Sbjct 34169 CCACCAATCCCTGTGGCGAGCAACCTCTCCCGCCCTATGGCGCCTGTCTTTTAGGATCAA 34228 Query 33251 TCAA-CTTG 33258 |||| |||| Sbjct 34229 TCAATCTTG 34237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198814225010574