Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq1163 93.3 8e-14 seq4328 87.8 4e-12 seq1936 87.8 4e-12 >seq1163 Length=3916 Score = 93.3 bits (102), Expect = 8e-14 Identities = 71/83 (86%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 294856 GAATATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCT 294915 ||| |||||||| || | ||| ||||||| | |||||||||||||||| ||||||||| Sbjct 3320 GAAAATGGTGCCCCCACACGGACTCGAACC-GCGGACCTACTGATTACAAATCAGTTGCT 3378 Query 294916 CTACCAGCTGAGCTATAACGGCA 294938 ||||||||||||||||| |||| Sbjct 3379 CTACCAGCTGAGCTATAGGGGCA 3401 >seq4328 Length=1462 Score = 87.8 bits (96), Expect = 4e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 294861 TGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTACC 294920 ||||||| || | ||| ||||||| | |||||||||||||||| |||||||||||||| Sbjct 275 TGGTGCCCCCACACGGACTCGAACC-GCGGACCTACTGATTACAAATCAGTTGCTCTACC 333 Query 294921 AGCTGAGCTATAACGGCA 294938 |||||||||||| |||| Sbjct 334 AGCTGAGCTATAGGGGCA 351 >seq1936 Length=2622 Score = 87.8 bits (96), Expect = 4e-12 Identities = 68/78 (87%), Gaps = 5/78 (6%) Strand=Plus/Plus Query 294856 GAATATGGTG--CCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTG 294913 ||| |||||| ||| ||| || ||||||||| | ||||||||||||| |||||||||| Sbjct 941 GAAAATGGTGAGCCGACAGGGG--TTCGAACCC-TGGACCTACTGATTAAAAGTCAGTTG 997 Query 294914 CTCTACCAGCTGAGCTAT 294931 |||||||||||||||||| Sbjct 998 CTCTACCAGCTGAGCTAT 1015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989124272484281