Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq44 82.4 9e-11 >seq44 Length=32007 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 78499 AGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACATCAACCGAACGCTGA 78558 || || || ||||||||||| |||||||||| || ||||| |||||| | || |||||| Sbjct 27858 AGCAGCGCATAGGAGGCGATGTTGAACGGCACGCCCAAGAACACATCAGCGGAGCGCTGA 27799 Query 78559 TACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAGAAACAGTGACACGGA 78618 || ||| || || || |||| || ||||||||| | ||||||||| || Sbjct 27798 TAGAGCTGGCAGGAAAGCTTGCCGTCCGCCACATAGAACTGGAACAGACAGTGACAGGGC 27739 Query 78619 CGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACGATGATCCCGCGATCG 78678 ||| ||||| ||||| | || | ||||| || || ||||| | || || | Sbjct 27738 GGCAGCGCCATATTATCTACGTCCGCCACATTCCAGGCCGACACGATCAGCCGCCGGGAG 27679 Query 78679 TCTGG 78683 ||||| Sbjct 27678 TCTGG 27674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568355805164160