Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26]
16,577 sequences; 29,349,011 total letters
Query= NC_029067.1
Length=138234
Score E
Sequences producing significant alignments: (Bits) Value
seq5001 93.3 4e-14
seq14329 82.4 7e-11
>seq5001
Length=1325
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/207 (71%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 18702 AGCAATTGCATTGATGGTTAGATCACGTCTACGTAAATCCTCTTCCAGTGTAACCCCA-- 18759
||| || ||||| ||||||| |||||| | | ||||||| ||||| ||||| |
Sbjct 960 AGCGATAGCATTAATGGTTAAATCACGCCGTTGCAAATCCTGCTCCAGCGTAACATCTGG 1019
Query 18760 TCCCACTCACA-AGTAAAGCCTTCATAACCCGTACCCGTCTTACGATCTGTTCTGGCAAG 18818
| | | | | | ||||||| ||| || |||| | || || || || | ||| ||
Sbjct 1020 TGCGGCATAGACACTAAAGCCGGTATAGCCTTTACCATTTTTGCGCTCGGTACGGGCCAG 1079
Query 18819 AGCATACTCATCTCCGGTTTCTGGATGTAAGAATACGGGAAAGTCTTTACCTACCTGCTT 18878
||||| || ||| ||||| ||| || | |||||| |||||||||||||| |||||||
Sbjct 1080 AGCATGTTCTTCTTTGGTTTTTGGGTGCAGGAATACCGGAAAGTCTTTACCCACCTGCTG 1139
Query 18879 GAAACCTAACGACAACATTTCCTCTGG 18905
| ||| | || ||||| ||||||
Sbjct 1140 ATAGCCTGCAGCCAGCATTTGCTCTGG 1166
>seq14329
Length=599
Score = 82.4 bits (90), Expect = 7e-11
Identities = 142/206 (69%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 18703 GCAATTGCATTGATGGTTAGATCACGTCTACGTAAATCCTCTTCCAGTGTAACCCCATCC 18762
||||| ||||||||||||| |||||| | ||| || |||||||| | || ||
Sbjct 267 GCAATGGCATTGATGGTTAAATCACGACGGATTAAGTCATCTTCCAGGCTCACATCAGGT 326
Query 18763 CA---CTCACAAGTAAAGCCTTCATAACCCGTACCCGTCTTACGATCTGTTCTGGCAAGA 18819
| | | | || ||||||| ||||||| | |||| ||| || || ||||| || ||
Sbjct 327 GAAGTATGAAAGGTGAAGCCTTTATAACCCTTGCCCGACTTGCGTTCCGTTCTTGCCAGG 386
Query 18820 GCATACTCATCTCCGGTTTCTGGATGTAAGAATACGGGAAAGTCTTTACCTACCTGCTTG 18879
||||| || ||| || || ||||| | || || || ||||| | || ||| || ||
Sbjct 387 GCATATTCTTCTTTTGTCTCAGGATGCAGAAACACCGGGAAGTCACTGCCGACCGGCGTG 446
Query 18880 AAACCTAACGACAACATTTCCTCTGG 18905
| ||| | | ||||||||| ||
Sbjct 447 TATCCTTCTGCGACCATTTCCTCAGG 472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 442129166322480
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |