Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq486 152 5e-32 seq44 93.3 4e-14 >seq486 Length=7659 Score = 152 bits (168), Expect = 5e-32 Identities = 209/292 (72%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 6506 GGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAG 6565 |||| ||| ||| |||| || | |||||| | | | |||||| |||||| |||| Sbjct 2630 GGGAGCGGGCGGTGCTCGCGCTCGAGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAG 2689 Query 6566 ATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGCG 6625 || |||||||| || || || ||||| | ||||| |||| ||| || || ||| Sbjct 2690 ATGTGCGCATCGCCGAAGGTGTGCACGAAGTCCCCCACTCCCAATCCCGTCACCTGCGCG 2749 Query 6626 ATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCT 6685 ||||||| ||| || | |||||||| || |||||||||||||| || | || ||| Sbjct 2750 ATCATGTGCGTCAGGATGGCGTAACTGGCGATGTTGAACGGCACGCCGAGGAACAGGTCC 2809 Query 6686 CCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAGAGG 6745 |||| || || |||||||||||| ||||| || ||||||||||| ||| | || Sbjct 2810 GCCGAGCGCTGGTAGAGCTGGCAGCTCAGCTTGCCGCCGGCGACGTAGAACTGGAACAGC 2869 Query 6746 GTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGC 6797 ||||||||| || || |||||| | ||| || | ||||||||||| Sbjct 2870 AGGTGGCACGGCGGCAGGGCCATCTGGTCGAGTTCGGCCACGTTCCACGCGC 2921 Score = 152 bits (168), Expect = 5e-32 Identities = 209/292 (72%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 34548 GCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCC 34607 ||||||||||| | || ||| | |||||| || || ||||||||| || | || Sbjct 2921 GCGCGTGGAACGTGGCCGAACTCGACCAGATGGCCCTGCCGCCGTGCCACCTGCTGTTCC 2862 Query 34608 AATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGG 34667 | ||||||||||| || ||||| |||||||||||| || || |||| ||| || Sbjct 2861 AGTTCTACGTCGCCGGCGGCAAGCTGAGCTGCCAGCTCTACCAGCGCTCGGCGGACCTGT 2802 Query 34668 GGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATG 34727 | || |||||||||||||| || |||||||| | || ||| |||||||||| || | Sbjct 2801 TCCTCGGCGTGCCGTTCAACATCGCCAGTTACGCCATCCTGACGCACATGATCGCGCAGG 2742 Query 34728 TCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGA 34787 | ||| |||| ||||| | ||||| || || || |||||||| |||||| | Sbjct 2741 TGACGGGATTGGGAGTGGGGGACTTCGTGCACACCTTCGGCGATGCGCACATCTACACCA 2682 Query 34788 ACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCC 34839 ||||| |||||| | | | |||||| | || |||| ||| ||| |||| Sbjct 2681 ACCACGTCGAGCAGGTGAAAACCCAGCTCGAGCGCGAGCACCGCCCGCTCCC 2630 >seq44 Length=32007 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 |||||||| || || || ||| || | ||| ||||| || ||| | || |||| ||| Sbjct 27728 ATGGCGCTGCCGCCCTGTCACTGTCTGTTCCAGTTCTATGTGGCGGACGGCAAGCTTTCC 27787 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 |||||||||||||| || || | || || || || |||||||||||||| || Sbjct 27788 TGCCAGCTCTATCAGCGCTCCGCTGATGTGTTCTTGGGCGTGCCGTTCAACATCGCCTCC 27847 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTG 34756 || || |||||| | | ||||| || || || |||| | | || ||| | | Sbjct 27848 TATGCGCTGCTCTTGCAGATGATGGCGCAGGTGACGGGGCTCGAAGTGGGCGAGTTCATC 27907 Query 34757 CATACGTTGGGGGATGCGCATATCTA 34782 || || || |||||||||||| |||| Sbjct 27908 CACACTTTTGGGGATGCGCATCTCTA 27933 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 6563 TAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGA 6622 |||| |||||||||||| || || || | | ||| || | | |||| || || Sbjct 27933 TAGAGATGCGCATCCCCAAAAGTGTGGATGAACTCGCCCACTTCGAGCCCCGTCACCTGC 27874 Query 6623 GCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATG 6682 || ||||| | | |||||| || || || |||||||||||||| || || || Sbjct 27873 GCCATCATCTGCAAGAGCAGCGCATAGGAGGCGATGTTGAACGGCACGCCCAAGAACACA 27814 Query 6683 TCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAG 6742 || | || || ||||||||||||||||| |||| || | ||| || ||||| ||| | Sbjct 27813 TCAGCGGAGCGCTGATAGAGCTGGCAGGAAAGCTTGCCGTCCGCCACATAGAACTGGAAC 27754 Query 6743 AGGGTGTGGCACGGGGGGAGCGCCAT 6768 || ||| || || || |||||||| Sbjct 27753 AGACAGTGACAGGGCGGCAGCGCCAT 27728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448169514427440