Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq8814 91.5 4e-13 seq5976 91.5 4e-13 seq379 91.5 4e-13 seq5356 89.7 1e-12 seq5532 87.8 4e-12 seq10039 86.0 1e-11 seq5564 86.0 1e-11 seq2675 86.0 1e-11 >seq8814 Length=899 Score = 91.5 bits (100), Expect = 4e-13 Identities = 91/114 (80%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 6767 TTGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCA 6824 ||||||| ||||||||| ||| ||||||||| | |||||||| | || ||| | |||| Sbjct 174 TTGAGAGGATGATCAGCAACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCA 116 Query 6825 GCAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878 ||||||| |||| || ||||||||||| |||| ||||| || ||| ||||| Sbjct 115 GCAGTGGGGAATCTTAGACAATGGGCGCAAGCCTGATCTAGCCATGCCGCGTGA 62 >seq5976 Length=1176 Score = 91.5 bits (100), Expect = 4e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 372630 ACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTG-TAAAAC 372688 ||||| ||| ||||||||||||||||||||||||| ||| ||| || |||| | ||| || Sbjct 521 ACAGACTAGGGGGTAGCGACTGTTTACTAAAAACATAGGGCTCTGCGAAGTGGCTAACAC 462 Query 372689 GATGTATAGGGTCTGAC 372705 || |||||||||||||| Sbjct 461 GACGTATAGGGTCTGAC 445 >seq379 Length=8950 Score = 91.5 bits (100), Expect = 4e-13 Identities = 80/96 (83%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825 |||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||| Sbjct 269 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 211 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGAT 6861 |||||| |||| || ||||||||||||||| |||| Sbjct 210 CAGTGGGGAATCTTGCACAATGGGCGAAAGCCTGAT 175 >seq5356 Length=1268 Score = 89.7 bits (98), Expect = 1e-12 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683 |||| ||||| || |||| |||||||||||||||||||||||| ||| || |||| | Sbjct 525 GGTGGCACAGACCAGGGGGTGGCGACTGTTTACTAAAAACACAGGGCTCTGCGAAGTCGC 466 Query 372684 AAAACGATGTATAGGGTCTGAC 372705 || |||| |||||||||||||| Sbjct 465 AAGACGACGTATAGGGTCTGAC 444 >seq5532 Length=1239 Score = 87.8 bits (96), Expect = 4e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 372630 ACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACG 372689 ||||| || |||| |||||||||||||||||||||||| ||| || |||| | || ||| Sbjct 740 ACAGACCAGGGGGTGGCGACTGTTTACTAAAAACACAGGGCTCTGCGAAGTCGCAAGACG 799 Query 372690 ATGTATAGGGTCTGAC 372705 | |||||||||||||| Sbjct 800 ACGTATAGGGTCTGAC 815 >seq10039 Length=819 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/96 (82%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825 |||||| | || |||||||| ||||||||| | |||||||| | || ||| | ||||| Sbjct 357 TGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 299 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGAT 6861 |||||| ||||||| ||||||||||||||| |||| Sbjct 298 CAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT 263 >seq5564 Length=1230 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7591 ATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCT 7650 ||||| ||||| | |||||||| | | |||| || |||||||| || || |||||||| Sbjct 1070 ATGATCTTCTTCATGGTTATGCCTGCTCTGATTGGTGGTTTCGGCAACTGGTTCGTTCCG 1129 Query 7651 TTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATAT 7697 | ||||||||||| || |||||||| || || | | |||||||| Sbjct 1130 CTGATGATTGGTGCGCCGGATATGGCGTTCCCGCGTATGAACAATAT 1176 >seq2675 Length=2078 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/96 (82%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 6767 TTGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCA 6824 ||||||| ||||||||| ||| ||||||||| | |||||||| | || ||| | |||| Sbjct 1984 TTGAGAGGATGATCAGCAACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCA 2042 Query 6825 GCAGTGGAGAATATTTGACAATGGGCGAAAGCTTGA 6860 ||||||| |||| || ||||||||||| |||| ||| Sbjct 2043 GCAGTGGGGAATCTTAGACAATGGGCGCAAGCCTGA 2078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192277914944438