Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq486 134 1e-26 seq44 93.3 3e-14 seq10619 89.7 4e-13 seq13573 86.0 5e-12 >seq486 Length=7659 Score = 134 bits (148), Expect = 1e-26 Identities = 182/252 (72%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 29625 GCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTC 29684 |||| | ||||||||| | ||| | | || ||||||| ||||| ||| ||||| | Sbjct 2643 GCTCGCGCTCGAGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAGATGTGCGCATCGC 2702 Query 29685 CCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGA 29744 | | |||||| || || || ||| | | | || || || || || ||||||| ||| | Sbjct 2703 CGAAGGTGTGCACGAAGTCCCCCACTCCCAATCCCGTCACCTGCGCGATCATGTGCGTCA 2762 Query 29745 GGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGT 29804 ||| | ||| ||||||||||| || ||||| ||||| || |||| | || | ||||| Sbjct 2763 GGATGGCGTAACTGGCGATGTTGAACGGCACGCCGAGGAACAGGTCCGCCGAGCGCTGGT 2822 Query 29805 AGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCA--TGGCACGG 29862 |||||||||| |||| ||| || ||||| ||||| ||| ||| |||||||| Sbjct 2823 AGAGCTGGCAGCTCAGCTTGCCGCCGGCGACGTAGAACTGGAACA--GCAGGTGGCACGG 2880 Query 29863 AGGAAGGGCCAT 29874 || |||||||| Sbjct 2881 CGGCAGGGCCAT 2892 >seq44 Length=32007 Score = 93.3 bits (102), Expect = 3e-14 Identities = 202/300 (67%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 29669 TAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29728 |||| || ||||| || | ||||||| ||||| ||| ||| ||||| || || || Sbjct 27933 TAGAGATGCGCATCCCCAAAAGTGTGGATGAACTCGCCCACTTCGAGCCCCGTCACCTGC 27874 Query 29729 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATG 29788 |||||||| | | ||| || | ||| ||||||||| || ||||| || | || Sbjct 27873 GCCATCATCTGCAAGAGCAGCGCATAGGAGGCGATGTTGAACGGCACGCCCAAGAACACA 27814 Query 29789 TCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 29848 || | || | ||| ||||||||||| || |||| ||||| ||| || ||||| || Sbjct 27813 TCAGCGGAGCGCTGATAGAGCTGGCAGGAAAGCTTGCCGTCCGCCACATAGAACTGGAAC 27754 Query 29849 ATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACAC 29907 | | || || || || || || ||||| | | | ||| |||||||| |||| Sbjct 27753 A-GACAGTGACAGGGCGGCAGCGCCATATTATCTACGTCCGCCACATTCCAGGCCGACAC 27695 Query 29908 GATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATC 29967 ||| | |||| | ||||| || ||| ||| |||| | ||||| | |||||| Sbjct 27694 GATCAGCCGCCGGGAGTCTGGATTATTCTCGATCTGGTCAATCAGGTTTTTGATCTGATC 27635 >seq10619 Length=779 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/225 (69%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 29652 GTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTT 29711 |||||| |||| || || | || || || || | ||||||||||| || |||| | Sbjct 511 GTTCCAGATGGTTCAGATAAAGATGCGCGTCACCAAACGTGTGGACAAAATCGCCCGCCT 452 Query 29712 CTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGG 29771 || || ||| || || ||||| | || | || | ||| ||| || || |||| Sbjct 451 TCAGATCGCAGACCTGGGCAATCATCTCTGTCAACAGCGCATAGGAGGCAATATTGAAGG 392 Query 29772 GCACCCCGAGCCCCATGTC--CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTC 29829 ||||||| || || || | ||| | |||||||||||| ||||| |||| ||||| Sbjct 391 GCACCCCCAGAAAGATATCGGCACTG--CGCTGGTAGAGCTGACACGAAAGCTTGCCGTC 334 Query 29830 GCTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 ||| || |||||| ||| | |||||| || || |||||||| Sbjct 333 AGCCACATAGAACTGAAACAGGCAATGGCATGGCGGCAGGGCCAT 289 >seq13573 Length=635 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 29652 GTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTT 29711 |||||| |||| | || | ||| || || || | |||||||||||||||||||| | Sbjct 451 GTTCCAGATGGTTTATATACAAGTGCGCGTCGCCGAATGTGTGGACAAACTCTCCCGGCT 392 Query 29712 CTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGG 29771 ||| ||| || | | |||||||| ||| || | || ||| ||||| || || | Sbjct 391 CTAACCCTGTTGCTCGCGCCATCATCATCGTCAGCAAAGCATAGGATGCGATATTGAACG 332 Query 29772 GCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGC 29831 | || || || | || | || | || |||||||| || |||| |||||| Sbjct 331 GGACACCAAGGAAGACATCAGCCGAACGTTGATAGAGCTGACAATTTAGCTTTCCGTCCA 272 Query 29832 TCACGTAAAACTGACACATGGCA-TGGCACGGAGGAAGGGCCAT 29874 | |||| ||||||| ||| |||| ||||| || || || ||||| Sbjct 271 TAACGTTAAACTGAAACA-GGCAGTGGCATGGCGGCAGCGCCAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406081141960222