Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq486 118 8e-22 seq13573 87.8 1e-12 >seq486 Length=7659 Score = 118 bits (130), Expect = 8e-22 Identities = 176/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 27119 GCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTC 27178 |||| | ||||||||| || |||| | | || ||||| | ||||| ||| || || | Sbjct 2643 GCTCGCGCTCGAGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAGATGTGCGCATCGC 2702 Query 27179 CCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGA 27238 | | |||||| || || || ||| | | | || || || || || ||||||| ||| | Sbjct 2703 CGAAGGTGTGCACGAAGTCCCCCACTCCCAATCCCGTCACCTGCGCGATCATGTGCGTCA 2762 Query 27239 GGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGT 27298 ||| | ||| ||||||||||| || || || ||||| || |||| |||| | ||||| Sbjct 2763 GGATGGCGTAACTGGCGATGTTGAACGGCACGCCGAGGAACAGGTCCGCCGAGCGCTGGT 2822 Query 27299 AGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAG 27358 ||||||| || |||| || || ||||| ||||| | | ||||||||| | Sbjct 2823 AGAGCTGGCAGCTCAGCTTGCCGCCGGCGACGTAGAACTGGAACAGCAGGTGGCACGGCG 2882 Query 27359 GAAGAGCCAT 27368 | || ||||| Sbjct 2883 GCAGGGCCAT 2892 >seq13573 Length=635 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 27168 GTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 27227 ||| ||||| || | |||||||||||||||||||| |||| ||| || | | ||||| Sbjct 429 GTGCGCGTCGCCGAATGTGTGGACAAACTCTCCCGGCTCTAACCCTGTTGCTCGCGCCAT 370 Query 27228 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCC 27287 ||| ||| || | || ||| ||||| || || || || || || | || | Sbjct 369 CATCATCGTCAGCAAAGCATAGGATGCGATATTGAACGGGACACCAAGGAAGACATCAGC 310 Query 27288 CGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGC 27347 ||| | || ||||||||||| |||| ||| || | |||| ||||||| | | | Sbjct 309 CGAACGTTGATAGAGCTGACAATTTAGCTTTCCGTCCATAACGTTAAACTGAAACAGGCA 250 Query 27348 GTGGCACGGAGGAAGAGCCAT 27368 |||||| || || || ||||| Sbjct 249 GTGGCATGGCGGCAGCGCCAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369432547652087