Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq7298 95.1 4e-15 seq7974 93.3 1e-14 seq5661 84.2 7e-12 seq479 84.2 7e-12 >seq7298 Length=1026 Score = 95.1 bits (104), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGG---TGTCCGG 34043 ||| || || || || | ||||| | |||||||| ||| | || | ||||| Sbjct 576 GCCATTTCGCTGTTTACCAATGATAATCTCAGCCAGGCCT---TTCTCAGCACTGTCCTC 520 Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103 || || |||||||| ||||| | ||||| || | |||||||||||||||||| | || Sbjct 519 ATGGTAAACCTCGTCCCGGTAGATAAACATAATTAAGTCGGCGTCCTGCTCGATTGAGCC 460 Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTT 34163 ||||| |||| ||| || | | ||| || || | | ||||| |||||| ||||| Sbjct 459 CGACTCCCGCAAGTCAGAGTTAACCGGACGTTTATCAGCGCGCTGTTCCAGGCCACGGTT 400 Query 34164 GAGCTGCGACAGCACGATCACGGG 34187 ||||| ||||| | ||||| || Sbjct 399 CAGCTGAGACAGGGCTATCACCGG 376 >seq7974 Length=968 Score = 93.3 bits (102), Expect = 1e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103 || ||||||||| || || || | |||| ||| || || || |||||||| ||||| || Sbjct 281 GTCATAGACCTCATCCCGATAGATAAACAGGATGACATCCGCATCCTGCTCAATCGCGCC 222 Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTT 34163 |||||| | || |||||||| | ||| || || | | |||||||||||| || || Sbjct 221 GGACTCTCTCAAATCCGACATAACCGGGCGTTTATCGGTACGCTGCTCCAGGCTTCGATT 162 Query 34164 GAGCTGCGACAGCACGATCACGGGGA 34189 | ||||||||| | || || |||| Sbjct 161 TAACTGCGACAGAGCAATAACCGGGA 136 >seq5661 Length=1220 Score = 84.2 bits (92), Expect = 7e-12 Identities = 112/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113 || || ||| | |||||||||| |||||||||||||||||||| | || || || ||| Sbjct 968 TCTTCGCGGAAGACGAACATGACGACGTCGGCGTCCTGCTCGATGGAGCCTGATTCACGC 1027 Query 34114 AGGTCCGACATCATCGGTCGCTTG--TTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCG 34171 | |||||||| || |||||| |||| || | |||| ||| ||||||| | Sbjct 1028 AAGTCCGACAGTTGGGGGCGCTTGTCTTCG--CGGTTTTCCACCTGACGGCTGAGCTGGG 1085 Query 34172 ACAGCACGATCACGGGGATACCAAGCTCCATGGC 34205 | || ||||||| ||||| | ||||| |||| Sbjct 1086 AAAGGGCGATCACAGGGATGTCGAGCTCTTTGGC 1119 >seq479 Length=7726 Score = 84.2 bits (92), Expect = 7e-12 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 34064 ACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGCAGGTCCGACA 34123 |||||||||||| |||||||||||||||||||||| || || || || ||||| |||| Sbjct 1981 ACACGAACATGACGACGTCGGCGTCCTGCTCGATCGAGCCCGATTCCCGAAGGTCGGACA 1922 Query 34124 TCATCGGTCGCTTGT-TCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGACAGCACGATC 34182 ||| || |||| | || ||| |||| || |||||||||||| ||||| Sbjct 1921 ATTGCGGGCGTTTGTCTTCGCGGCT-TTCCACCTGTCGCGAAAGCTGCGACAGCGCGATC 1863 Query 34183 ACGGGGATACCAAGCTCCATGGC 34205 || ||||| | || ||| |||| Sbjct 1862 ACAGGGATGTCGAGTTCCTTGGC 1840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160432412360730