Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_030927.1 Length=45858 Score E Sequences producing significant alignments: (Bits) Value seq30 98.7 3e-16 seq83 87.8 5e-13 >seq30 Length=44443 Score = 98.7 bits (108), Expect = 3e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 24127 TTTGTGCCCCCTGTAGGACTCGAACCTACGACCTAGTGATTAAAAGTCACCAGCTCTACC 24186 || ||| || ||||||| |||||||||||||||||||||||| ||||||| |||||||| Sbjct 33154 TTGGTGGGCCGTGTAGGATTCGAACCTACGACCTAGTGATTAAGAGTCACCCGCTCTACC 33213 Query 24187 AACTGAGCTAAAGG 24200 ||||||||||| || Sbjct 33214 AACTGAGCTAACGG 33227 >seq83 Length=22750 Score = 87.8 bits (96), Expect = 5e-13 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 24135 CCCTGTAGGACTCGAACCTACGACCTAGTGATTAAAAGTCACCAGCTCTACCAACTGAGC 24194 ||||| |||| |||||||| ||||||| ||||||||||||| | |||||||||||||||| Sbjct 9628 CCCTGCAGGATTCGAACCTGCGACCTACTGATTAAAAGTCAGCCGCTCTACCAACTGAGC 9569 Query 24195 TAAAGG 24200 ||| || Sbjct 9568 TAAGGG 9563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146595136790680