Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq1036 98.7 1e-15 seq486 91.5 2e-13 seq44 86.0 9e-12 >seq1036 Length=4296 Score = 98.7 bits (108), Expect = 1e-15 Identities = 171/248 (69%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 99197 AAGAAA---GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTC 99253 |||||| ||||| || || || || ||| | | | || || | || |||||||| Sbjct 1738 AAGAAAACCGACCGCACCGGCACAGGCACCATCAGTGTGTTTGGCTATCAAATGCGTTTT 1797 Query 99254 AATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTATT 99313 || | ||| | ||||||||||| || || || || || || |||||||||||||| Sbjct 1798 GATTTACAACAGGGCTTTCCGCTTGTTACCACCAAAAAATGCCATCTGCGTTCGATTATT 1857 Query 99314 CACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGT 99373 || ||| | |||||||| | ||||| || ||||| | || | | || ||||| Sbjct 1858 CATGAATTACTGTGGTTTTTAAAAGGTGAAACCAACATTGGCTACCTGCAAGAAAATGGC 1917 Query 99374 GTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAA 99433 ||| | || ||| | || ||| || || || || ||||||||||||||||| Sbjct 1918 GTATCAATCTGGAATGAGTGGGCGACTGAAACAGGTGAGCTCGGACCGGTATACGGCGCG 1977 Query 99434 CAGTGGCG 99441 |||||||| Sbjct 1978 CAGTGGCG 1985 >seq486 Length=7659 Score = 91.5 bits (100), Expect = 2e-13 Identities = 183/274 (67%), Gaps = 12/274 (4%) Strand=Plus/Minus Query 99188 GGCGTGCCGAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATG 99247 ||||| | ||| | || || || || || || || || || | ||||| |||||||| Sbjct 3282 GGCGTCCGCAAGGACGATCGCACCGGCACGGGCACGCTCTCGGTCTTCGGCTACCAGATG 3223 Query 99248 CGTTTCAATCTGCAAGAAGGC------------TTTCCGCTGGTAACGACTAAGCGCTGT 99295 || ||||| || | || | | || || ||||| || || ||| Sbjct 3222 CGCTTCAACCTCGATGAGGCCACCGGCGGCGGGTTCCCACTGGTCACCACCAAGAAGGTC 3163 Query 99296 CACATGCGTTCGATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAA 99355 |||| ||| ||||| || ||||| |||||||||||||| |||||||| || || || Sbjct 3162 CACACGCGCTCGATCATCCACGAGCTGCTGTGGTTCCTCAAAGGCGACACGAACATCGCC 3103 Query 99356 TATTTAAATGATAATGGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTC 99415 || | || || || || || || |||||||| ||| | | ||| ||||| Sbjct 3102 TACCTGAAGGACAACAAAGTCACCATCTGGGACGAGTGGGCCGATGCCGCCGGCAACCTC 3043 Query 99416 GGACCGGTATACGGTAAACAGTGGCGGTCTTGGC 99449 || ||||| ||||| || |||||||| || |||| Sbjct 3042 GGCCCGGTCTACGGCAAGCAGTGGCGCTCCTGGC 3009 >seq44 Length=32007 Score = 86.0 bits (94), Expect = 9e-12 Identities = 168/246 (68%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 99197 AAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAAT 99256 |||| ||||| || || || || || | || | |||||||| |||||||| || || Sbjct 27359 AAGACCGACCGGACCGGTACAGGCACGCGCTCGGTGTTCGGGCATCAGATGCGCTTTGAT 27418 Query 99257 CTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTCGATTATTCA 99315 ||| || || ||||| |||| ||||||||| |||| ||| | || || | || Sbjct 27419 CTGGCCGACGGGTTTCCCATGGTCACGACTAAGAAGCTG-CACTTAAAGTCCATCGTGCA 27477 Query 99316 CGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGT 99375 || ||||| |||||| | ||||| || ||| | ||| | || | ||||| || Sbjct 27478 TGAGCTGCTCTGGTTCATCGCCGGCGACACAAATATTGCCTATCTCAAAGCAAATGGGGT 27537 Query 99376 AACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACA 99435 | ||||||||||||||| | | | | || || ||||| || || || || | || Sbjct 27538 GAGCATTTGGGACGAATGGGCGGATGAGAAGGGTGATCTCGGGCCAGTCTATGGGCACCA 27597 Query 99436 GTGGCG 99441 |||||| Sbjct 27598 GTGGCG 27603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716315539703400