Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq486 145 1e-29 seq44 118 2e-21 seq2124 87.8 3e-12 seq10619 84.2 3e-11 seq6724 84.2 3e-11 >seq486 Length=7659 Score = 145 bits (160), Expect = 1e-29 Identities = 159/212 (75%), Gaps = 12/212 (6%) Strand=Plus/Minus Query 202543 AAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGAC 202602 ||| | || || |||||||| ||||||| ||| | ||||| ||||||||| || || Sbjct 3273 AAGGACGATCGCACCGGCACGGGCACGCTCTCGGTCTTCGGCTACCAGATGCGCTTCAAC 3214 Query 202603 CTG---------ACCGAAGGC---TTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGT 202650 || |||| ||| ||||||||||| ||||| || ||||| ||| || Sbjct 3213 CTCGATGAGGCCACCGGCGGCGGGTTCCCACTGGTCACCACCAAGAAGGTCCACACGCGC 3154 Query 202651 TCTATCATTCACGAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAAC 202710 || ||||| |||||||||||||||||||| ||||| ||||| |||||| |||||||| Sbjct 3153 TCGATCATCCACGAGCTGCTGTGGTTCCTCAAAGGCGACACGAACATCGCCTACCTGAAG 3094 Query 202711 GATAACGGGGTCACTATCTGGGACGAATGGGC 202742 || ||| ||||| ||||||||||| ||||| Sbjct 3093 GACAACAAAGTCACCATCTGGGACGAGTGGGC 3062 >seq44 Length=32007 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 202539 TGAAAAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTT 202598 |||||||| ||||| ||||| || ||||||||||| |||||||| |||||||| || Sbjct 27355 TGAAAAGACCGACCGGACCGGTACAGGCACGCGCTCGGTGTTCGGGCATCAGATGCGCTT 27414 Query 202599 TGACCTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCAT 202658 ||| ||| |||| || || || |||| || || || ||| | ||| | || ||| | Sbjct 27415 TGATCTGGCCGACGGGTTTCCCATGGTCACGACTAAGAAGCTGCACTTAAAGTCCATCGT 27474 Query 202659 TCACGAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGG 202718 || |||||||| |||||| | || ||||| || || || || || | || || Sbjct 27475 GCATGAGCTGCTCTGGTTCATCGCCGGCGACACAAATATTGCCTATCTCAAAGCAAATGG 27534 Query 202719 GGTCACTATCTGGGACGAATGGGCG 202743 ||| | || ||||||||||||||| Sbjct 27535 GGTGAGCATTTGGGACGAATGGGCG 27559 >seq2124 Length=2445 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2710 TGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCG 2769 |||||||||| |||||||| |||| ||||||||| |||||||||||||||||| |||| Sbjct 1627 TGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTCCCG 1568 Query 2770 TCAGTCCTGCCATATC 2785 ||| || ||||| || Sbjct 1567 TCACTCGCGCCATCTC 1552 >seq10619 Length=779 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 202624 GTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTGCTGTGGTTCCTGAAA 202683 |||||||| || || | || ||| || ||||| || |||||||||||||| ||| Sbjct 1 GTGACCACCAAGAAACTGCATCTCAAATCGATCATCCATGAGCTGCTGTGGTTTCTGGCG 60 Query 202684 GGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATCTGGGACGAATGGGC 202742 || || ||||||||| || ||||| | || || ||| | ||||||||||||||||| Sbjct 61 GGTGATACCAACATCGCCTATCTGAAGGCGAATGGCGTCTCAATCTGGGACGAATGGGC 119 >seq6724 Length=1088 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 || ||||| || |||||||||||||||| | || || || || ||| |||| || | Sbjct 839 GATGGCTTTCCGTTGGTGACCACGAAAAAACTGCATCTGCGCTCAATCGTTCATGAATTA 780 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 ||||||| || || || |||||||||| ||||| || || || || || | || Sbjct 779 TTGTGGTTTTTGTCTGGTGATACCAACATCAAATACCTCAAGGAAAATGGTGTTTCGATT 720 Query 202729 TGGGACGAATGGGC 202742 |||||||||||||| Sbjct 719 TGGGACGAATGGGC 706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788156650242000