Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq486 318 3e-82 seq44 86.0 4e-12 >seq486 Length=7659 Score = 318 bits (352), Expect = 3e-82 Identities = 541/769 (70%), Gaps = 35/769 (5%) Strand=Plus/Minus Query 830 AAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGAC 889 ||||| |||||||||||||| |||||||| |||||| |||| |||| | | || Sbjct 3273 AAGGACGATCGCACCGGCACGGGCACGCTCTCGGTCTTCGGCTACCAGATGCGCTTCAAC 3214 Query 890 CTC---------ACCGAGGGC---TTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAA 937 ||| |||| ||| ||||| ||||||||||| ||| |||||| Sbjct 3213 CTCGATGAGGCCACCGGCGGCGGGTTCCCACTGGTCACCACCAAGAAGGTCCACACGCGC 3154 Query 938 TCGGTTGCGTACGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAAC 997 ||| | |||| || ||||||||||||| |||||||||||| | || || Sbjct 3153 TCGATCATCCACGAGCTGCTGTGGTTCCTCAAAGGCGACACGAACATCGCCTACCTGAAG 3094 Query 998 GACAACGGCGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTC 1057 |||||| |||||||||||||||||||||||||| |||| ||| |||||||| || ||| Sbjct 3093 GACAACAAAGTCACCATCTGGGACGAGTGGGCCGATGCCGCCGGCAACCTCGGCCCGGTC 3034 Query 1058 TACGGCGCGCAGTGGCGGCACTGGC--ATGTCGAGGACGGAGGATCGTCGTGGATTGACC 1115 |||||| ||||||||| ||||| | | || | ||| | || || |||| Sbjct 3033 TACGGCAAGCAGTGGCGCTCCTGGCGCACGCCGGG--CGGGGACACG------ATCGACC 2982 Query 1116 AGATCTCGGCCGCCGTGGAGCTGCTTC-GCGAGGACCCTGACTCGCGCCGGAACGTGGTA 1174 ||||| | | | ||| || | | | ||| |||| |||||||||||| | || Sbjct 2981 AGATCGCCGGTGTCGTCGATCAGATCAAGCGCA-ACCCCGACTCGCGCCGGCTGATTGTC 2923 Query 1175 TCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTC 1234 ||| |||||||| | || ||| | | ||||| || | ||||||||| | ||||| Sbjct 2922 AGCGCGTGGAACGTGGCCGAACTCGACCAGATGGCCCTGCCGCCGTGCCACCTGCTGTTC 2863 Query 1235 CAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACAT 1293 ||| | ||||||| || |||| ||| ||||| || ||||||||||| |||||| | Sbjct 2862 CAGTTCTACGTCGCCGGCGGCAAGCTGA-GCTGCCAGCTCTACCAGCGCTCGGCGGACCT 2804 Query 1294 GTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCA 1353 ||||||||| ||||||||||| |||||| ||||| |||| |||||||| ||||||| Sbjct 2803 GTTCCTCGGCGTGCCGTTCAACATCGCCAGTTACGCCATCCTGACGCACATGATCGCGCA 2744 Query 1354 GCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGC-CACATCTACA 1412 | | | || || | ||||| || | | ||| |||||| ||| |||||||||| Sbjct 2743 GGTGACGGGATTGGGAGTGGGGGACTTCGTGCACACCTTCGGCGA-TGCGCACATCTACA 2685 Query 1413 ACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCGACGACCGCGGCCC-TACCCGAGG 1471 |||||||||||| |||| | | |||||| || ||| | | |||| |||| Sbjct 2684 CCAACCACGTCGAGCAGGTGAAAACCCAGCTCGAGCG-CGAGCACCGCCCGCTCCCGTCC 2626 Query 1472 CTCGTGCTACACCACGCG--CCGTCGA--TCTTCGACTACCGGTACGAGCACATCCACCT 1527 | ||| ||| || | ||| ||| | |||| | | | | ||| ||||| | | Sbjct 2625 TTGAAGCTCAACCCCGAGGTCCG-CGACCTGTTCGCGTTCAGCTTCGACGACATCGCCAT 2567 Query 1528 CGTGAACTACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGA 1576 || ||||||||||||||||||| ||||||||||||| ||||| || ||| Sbjct 2566 CGAGAACTACGACCCGCACCCGGCGATCAAGGCGCCTGTGGCGGTATGA 2518 >seq44 Length=32007 Score = 86.0 bits (94), Expect = 4e-12 Identities = 337/523 (64%), Gaps = 14/523 (3%) Strand=Plus/Plus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || || ||||| || ||||||| |||||| ||| |||| | || || || Sbjct 27365 GACCGGACCGGTACAGGCACGCGCTCGGTGTTCGGGCATCAGATGCGCTTTGATCTGGCC 27424 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTT 955 || || || || ||||||| || ||| | ||||| || || | | | | || || Sbjct 27425 GACGGGTTTCCCATGGTCACGACTAAGAAGCTGCACTTAAAGTCCATCGTGCATGAGCTG 27484 Query 956 CTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATC 1015 || |||||| || |||||||| || | ||||| | || || || | ||| Sbjct 27485 CTCTGGTTCATCGCCGGCGACACAAATATTGCCTATCTCAAAGCAAATGGGGTGAGCATT 27544 Query 1016 TGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGG 1075 |||||||| ||||| || | || | ||||| || ||||| || |||||||| Sbjct 27545 TGGGACGAATGGGCGGATGAGAAGGGTGATCTCGGGCCAGTCTATGGGCACCAGTGGCGC 27604 Query 1076 CACTGGC--ATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGG 1133 ||||| | | | ||||| || || ||||| |||||| | | | Sbjct 27605 AGCTGGCCCACGCCC--GACGGCGGCACG------ATTGATCAGATCAAAAACCTGATTG 27656 Query 1134 AGCTGCTTCGCGAGGAC-CCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGT 1192 | | | | || || | || ||||| || ||| | || || || ||||| || | Sbjct 27657 ACCAGAT-CGAGAATAATCCAGACTCCCGGCGGCTGATCGTGTCGGCCTGGAATGTGGCG 27715 Query 1193 GACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGAC 1252 ||| | | ||||| || | || || ||| |||||||| | || || | ||| Sbjct 27716 GACGTAGATAATATGGCGCTGCCGCCCTGTCACTGTCTGTTCCAGTTCTATGTGGCGGAC 27775 Query 1253 GGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTT 1311 ||| ||| || |||| || |||| |||||| ||| || ||||| | || |||||||| Sbjct 27776 GGCAAGCTTTC-CTGCCAGCTCTATCAGCGCTCCGCTGATGTGTTCTTGGGCGTGCCGTT 27834 Query 1312 CAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAG 1354 ||| |||||||| || ||||| ||| ||| ||| | |||||| Sbjct 27835 CAACATCGCCTCCTATGCGCTGCTCTTGCAGATGATGGCGCAG 27877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296071371965877