Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq486 178 2e-39 seq1036 152 8e-32 seq44 131 3e-25 seq10619 123 4e-23 seq6724 98.7 2e-15 seq2046 98.7 2e-15 seq4008 93.3 7e-14 seq4350 89.7 8e-13 seq13573 87.8 3e-12 seq16440 86.0 1e-11 seq8261 86.0 1e-11 seq1724 86.0 1e-11 seq7532 84.2 3e-11 >seq486 Length=7659 Score = 178 bits (196), Expect = 2e-39 Identities = 189/252 (75%), Gaps = 12/252 (5%) Strand=Plus/Minus Query 201847 CGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACA 201906 ||| || ||||| |||||||| ||||| || ||||| |||||||||||| ||| | | Sbjct 3268 CGATCGCACCGGCACGGGCACGCTCTCGGTCTTCGGCTACCAGATGCGCTTCAACCTCGA 3209 Query 201907 AGAAG------------GTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAAT 201954 || | | || || |||||||||||||| ||||| ||| || || || Sbjct 3208 TGAGGCCACCGGCGGCGGGTTCCCACTGGTCACCACCAAGAAGGTCCACACGCGCTCGAT 3149 Query 201955 CATCCATGAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAA 202014 |||||| ||||||||||||||||||| || ||||| |||||| || |||| ||||| Sbjct 3148 CATCCACGAGCTGCTGTGGTTCCTCAAAGGCGACACGAACATCGCCTACCTGAAGGACAA 3089 Query 202015 CAACGTCACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGG 202074 ||| ||||||||||||||||| ||||| ||| ||| || | |||||||| ||||| Sbjct 3088 CAAAGTCACCATCTGGGACGAGTGGGCCGATGCCGCCGGCAACCTCGGCCCGGTCTACGG 3029 Query 202075 TAAGCAATGGCG 202086 ||||| ||||| Sbjct 3028 CAAGCAGTGGCG 3017 >seq1036 Length=4296 Score = 152 bits (168), Expect = 8e-32 Identities = 216/304 (71%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 201791 ATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCCGAC 201850 ||||||||||| || || ||| |||| |||| ||| |||| || ||| ||||| Sbjct 1690 ATGAAACAATACCTTGATTTAATGCGCCATGTATTAGAACACGGCCATAAGAAAACCGAC 1749 Query 201851 CGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGAA 201910 || ||||| || |||||| || ||| || || || ||||| ||| | |||||| | Sbjct 1750 CGCACCGGCACAGGCACCATCAGTGTGTTTGGCTATCAAATGCGTTTTGATTTACAACAG 1809 Query 201911 GGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCTG 201970 || |||||||| || ||||||||||| || || ||||| || || ||||| | ||| Sbjct 1810 GGCTTTCCGCTTGTTACCACCAAAAAATGCCATCTGCGTTCGATTATTCATGAATTACTG 1869 Query 201971 TGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTGG 202030 ||||| | | ||||| |||||||| || || |||| || ||| | |||||| Sbjct 1870 TGGTTTTTAAAAGGTGAAACCAACATTGGCTACCTGCAAGAAAATGGCGTATCAATCTGG 1929 Query 202031 GACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGTAGC 202090 | || |||||| | ||| ||||| | || ||||| ||||| ||| ||||| ||| Sbjct 1930 AATGAGTGGGCGACTGAAACAGGTGAGCTCGGACCGGTATACGGCGCGCAGTGGCGCAGC 1989 Query 202091 TGGA 202094 |||| Sbjct 1990 TGGA 1993 >seq44 Length=32007 Score = 131 bits (144), Expect = 3e-25 Identities = 182/254 (72%), Gaps = 1/254 (0%) Strand=Plus/Plus Query 201841 AAAAG-CCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTA 201899 ||||| ||||||| |||||||| ||||| | ||| || ||||| | |||||||||||| Sbjct 27357 AAAAGACCGACCGGACCGGTACAGGCACGCGCTCGGTGTTCGGGCATCAGATGCGCTTTG 27416 Query 201900 ACTTACAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCC 201959 | | || || ||||| ||||||| || || ||| | ||| | || ||| | | Sbjct 27417 ATCTGGCCGACGGGTTTCCCATGGTCACGACTAAGAAGCTGCACTTAAAGTCCATCGTGC 27476 Query 201960 ATGAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACG 202019 |||||||||| |||||| || || ||||| || || ||| | |||| || | Sbjct 27477 ATGAGCTGCTCTGGTTCATCGCCGGCGACACAAATATTGCCTATCTCAAAGCAAATGGGG 27536 Query 202020 TCACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGC 202079 | | ||| |||||||||||||||||| | || ||||| | || || || || || | | Sbjct 27537 TGAGCATTTGGGACGAATGGGCGGATGAGAAGGGTGATCTCGGGCCAGTCTATGGGCACC 27596 Query 202080 AATGGCGTAGCTGG 202093 | ||||| |||||| Sbjct 27597 AGTGGCGCAGCTGG 27610 >seq10619 Length=779 Score = 123 bits (136), Expect = 4e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 201923 GTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCTGTGGTTCCTCATG 201982 || |||||||| || | || || || ||||||||||||||||||||||| || | Sbjct 1 GTGACCACCAAGAAACTGCATCTCAAATCGATCATCCATGAGCTGCTGTGGTTTCTGGCG 60 Query 201983 GGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTGGGACGAATGGGCG 202042 ||||| ||||||||| ||| |||| | || |||| | ||||||||||||||||| Sbjct 61 GGTGATACCAACATCGCCTATCTGAAGGCGAATGGCGTCTCAATCTGGGACGAATGGGCC 120 Query 202043 GATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGTAGCTGG 202093 || ||||||| || | || ||||| ||||| | |||||||| |||||| Sbjct 121 GACGAAAACGGCGATCTGGGGCCGGTCTACGGCCATCAATGGCGCAGCTGG 171 >seq6724 Length=1088 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 201908 GAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTG 201967 || || |||||| |||| ||||| ||||| | || || || |||||| | ||||| | Sbjct 839 GATGGCTTTCCGTTGGTGACCACGAAAAAACTGCATCTGCGCTCAATCGTTCATGAATTA 780 Query 201968 CTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATC 202027 ||||||| | ||||| ||||||||| | || | || || || || | || Sbjct 779 TTGTGGTTTTTGTCTGGTGATACCAACATCAAATACCTCAAGGAAAATGGTGTTTCGATT 720 Query 202028 TGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCG 202086 |||||||||||||| || |||||||||| || ||||| || || || | |||||||| Sbjct 719 TGGGACGAATGGGCTGACGAAAACGGTGATTTGGGCCCTGTATATGGGCATCAATGGCG 661 >seq2046 Length=2500 Score = 98.7 bits (108), Expect = 2e-15 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 3490 TTGGCGCGGTACTCAAGCGGTCAACGAGAGCAGACTGTAAATCTGTTGCCTTCGGGCTTC 3549 |||| | ||||| ||||||||||||| | ||||||||||||||||||| | || | |||| Sbjct 1390 TTGGAGGGGTACCCAAGCGGTCAACGGGGGCAGACTGTAAATCTGTTGGC-TCAGCCTTC 1332 Query 3550 GTAGGTTCAAATCCTTCCCTCGCCACCAA 3578 |||||||| |||||| ||| | ||||||| Sbjct 1331 GTAGGTTCGAATCCTACCCCCTCCACCAA 1303 >seq4008 Length=1273 Score = 93.3 bits (102), Expect = 7e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 4033 GTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCTAC 4091 |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| Sbjct 1014 GTAGCTCAGTTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTAGTTCAAATCTAC 956 >seq4350 Length=1453 Score = 89.7 bits (98), Expect = 8e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 4033 GTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCTAC 4091 |||||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||| Sbjct 1220 GTAGCTCAGTTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTAGTTCGAATCTAC 1162 >seq13573 Length=635 Score = 87.8 bits (96), Expect = 3e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 201983 GGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTGGGACGAATGGGCG 202042 || |||||||||||| | | | ||||| ||| || |||| |||||||| ||||| Sbjct 1 GGCGACACCAACATCAAATGGCTAAAAGAGCGCAAGGTTTCCATTTGGGACGAGTGGGCC 60 Query 202043 GATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGTAGCTGGATTGC 202098 ||| | |||||||| | || || || || ||||||||||||||||| ||| |||| Sbjct 61 GATGAGAACGGTGATCTCGGACCTGTTTATGGTAAGCAATGGCGTAGTTGGGTTGC 116 >seq16440 Length=503 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 4028 GTCTCGTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGT 4087 |||| ||||||||| |||||||||||| | ||||||||| | |||||||||||||| ||| Sbjct 9 GTCT-GTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTAGTTCGAGT 67 Query 4088 CTACTCGAGAC 4098 |||||| |||| Sbjct 68 CTACTC-AGAC 77 >seq8261 Length=943 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 4033 GTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCT 4089 |||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| Sbjct 213 GTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAAGTTCAAGTCT 157 >seq1724 Length=1402 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 4028 GTCTCGTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGT 4087 |||| ||||||||| |||||||||||| | ||||||||| | |||||||||||||| ||| Sbjct 990 GTCT-GTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTAGTTCGAGT 932 Query 4088 CTACTCGAGAC 4098 |||||| |||| Sbjct 931 CTACTC-AGAC 922 >seq7532 Length=1006 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 4033 GTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCTAC 4091 |||||||||||||||||||||| | ||||||||| | |||||||||||||| ||||||| Sbjct 832 GTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTAGTTCGAGTCTAC 774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787839915886920