Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq486 109 9e-19 seq2046 102 1e-16 >seq486 Length=7659 Score = 109 bits (120), Expect = 9e-19 Identities = 123/167 (74%), Gaps = 12/167 (7%) Strand=Plus/Minus Query 200137 CAGATGCGCTTCAATCTACAAGA------------CGGCTTCCCATTGGTGACGACCAAG 200184 |||||||||||||| || | || ||| |||||| |||| || |||||| Sbjct 3228 CAGATGCGCTTCAACCTCGATGAGGCCACCGGCGGCGGGTTCCCACTGGTCACCACCAAG 3169 Query 200185 AAGTGCCATCTCCGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAAT 200244 ||| ||| || || ||||| ||||||||| |||||||||| || || ||||| || Sbjct 3168 AAGGTCCACACGCGCTCGATCATCCACGAGCTGCTGTGGTTCCTCAAAGGCGACACGAAC 3109 Query 200245 ATCAAGTATCTGAACGATAACAATGTCACCATTTGGGACGAATGGGC 200291 ||| || ||||| || ||||| |||||||| |||||||| ||||| Sbjct 3108 ATCGCCTACCTGAAGGACAACAAAGTCACCATCTGGGACGAGTGGGC 3062 >seq2046 Length=2500 Score = 102 bits (112), Expect = 1e-16 Identities = 78/91 (86%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 3035 TTTGGCGCGGTACTCAAGCGGTCAACGAGAGCAGACTGTAAATCTGTTGCCTTCGGGCTT 3094 ||||| | ||||| ||||||||||||| | ||||||||||||||||||| | || | ||| Sbjct 1391 TTTGGAGGGGTACCCAAGCGGTCAACGGGGGCAGACTGTAAATCTGTTGGC-TCAGCCTT 1333 Query 3095 CGTAGGTTCAAATCCTTCCCTCGCCACCAAA 3125 ||||||||| |||||| ||| | |||||||| Sbjct 1332 CGTAGGTTCGAATCCTACCCCCTCCACCAAA 1302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783197678016000