Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq7298 192 4e-44 seq7974 152 3e-32 seq16555 104 2e-17 >seq7298 Length=1026 Score = 192 bits (212), Expect = 4e-44 Identities = 309/444 (70%), Gaps = 0/444 (0%) Strand=Plus/Minus Query 96695 CCAGCATAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATT 96754 || ||||||||||||||||| || | || || | || | || | ||| |||| || Sbjct 638 CCGGCATAGTTATCAAACCGGGAAAAATGACCATGGAAGGTTAAGCGCACTTTGCCGATG 579 Query 96755 GGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTATCCGGG 96814 ||||||||||| || || || || || | ||| || | ||| ||| | || ||| Sbjct 578 GGGCCATTTCGCTGTTTACCAATGATAATCTCAGCCAGGCCTTTCTCAGCACTGTCCTCA 519 Query 96815 TGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCT 96874 || ||||| ||||| || || | |||||| || | ||| ||||||||||| |||| || Sbjct 518 TGGTAAACCTCGTCCCGGTAGATAAACATAATTAAGTCGGCGTCCTGCTCGATTGAGCCC 459 Query 96875 GATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTA 96934 || || || || || || || ||||| ||||| || || |||||||| || || || Sbjct 458 GACTCCCGCAAGTCAGAGTTAACCGGACGTTTATCAGCGCGCTGTTCCAGGCCACGGTTC 399 Query 96935 AGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGA 96994 || || |||| || | |||||| |||| | ||| ||||| || | || | ||| || Sbjct 398 AGCTGAGACAGGGCTATCACCGGCACTTTCAGTTCTTTCGCTAAGGATTTTAATGAACGG 339 Query 96995 GAAATCTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCTCCGGGACGCGCATAAGTTGC 97054 ||||| || |||||||| | || ||||| || | |||| || ||| || ||| Sbjct 338 GAAATTTCAGCAATTTCTAAGGTGCGGTTTTCACTTAAACCCGGCACTGTCATCAGCTGC 279 Query 97055 AGGTAGTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAACACGACGAGCGCGG 97114 | || |||| |||||||||||| || || |||| || || || || || | Sbjct 278 AAATAATCGACCATAATCATGCTTAAGCCGCCATGCTCCCGCGCCACCCGCCGGGCCCTC 219 Query 97115 GAACGTAGCTCTGTCGGCGTCAGG 97138 ||||| | || |||||||||||| Sbjct 218 GAACGCACTTCAGTCGGCGTCAGG 195 >seq7974 Length=968 Score = 152 bits (168), Expect = 3e-32 Identities = 215/302 (71%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 96701 TAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGGCCA 96760 ||||| ||||| || | ||| || || ||| |||| | ||| ||||||| ||||| Sbjct 394 TAGTTTTCAAAACGCGTGTACTGACCACGAAACGCCAGACGCACTTTGCCAATCGGGCCG 335 Query 96761 TTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTATCCGGGTGATAA 96820 || || ||||| || ||||| | ||| ||||| ||||| |||| || || ||| Sbjct 334 TTACGCTGCTTACCAATAATAATCTCAGCAATACCCTTATCGGCGCTCTCTTCGTCATAG 275 Query 96821 ACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCA 96880 || || || ||||| | ||||| ||| | || || ||||||||||| || || || || Sbjct 274 ACCTCATCCCGATAGATAAACAGGATGACATCCGCATCCTGCTCAATCGCGCCGGACTCT 215 Query 96881 CGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAGTTGT 96940 | ||||| || | ||||| ||||| || | |||||| || || |||||| | || Sbjct 214 CTCAAATCCGACATAACCGGGCGTTTATCGGTACGCTGCTCCAGGCTTCGATTTAACTGC 155 Query 96941 GACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAATC 97000 |||| || | ||||| || ||||| || |||| ||| ||||||||||| ||||| Sbjct 154 GACAGAGCAATAACCGGGACGCTCAATTCTTTGGCCATCGCTTTCAGTGAGCGTGAAATT 95 Query 97001 TC 97002 || Sbjct 94 TC 93 >seq16555 Length=501 Score = 104 bits (114), Expect = 2e-17 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 62469 AATCAGTGGTTTCACTGAGGAAGAACT-ATTAGGCCAGCCTCACAACATCGTAAGACACC 62527 ||| ||||||| ||| |||||||| || |||| | | ||| || || | ||||||| Sbjct 430 AATAAGTGGTTACACCGAGGAAGAGCTTATTAATCACGG-TCATAATATTCTCAGACACC 372 Query 62528 CAGATATGCCGCCTGCTGCATTTGAGCATATGTGG-AGTACATTAAAATCTGGCCGCTCA 62586 | |||||||| | ||||| || | ||||||| | || |||| ||| ||| | || Sbjct 371 CGGATATGCCTGCAGCTGCGTTCAAACATATGTAGCAGACCATTCAAAA-TGGTCAGTCT 313 Query 62587 TGGATGGGGCTAGTAAAAAATCGCTGTAAAAATGGCGACCACTATTGGGTAAGTGCTTAT 62646 ||| || | || |||||||||||||||||||| ||||| ||||||||| ||| ||| Sbjct 312 TGGCGTGGCATTGTTAAAAATCGCTGTAAAAATGGGGACCATTATTGGGTAGATGCGTAT 253 Query 62647 GTAACGCCAATAGCTAAGAATGGTTCGATTGTTGAATACCAGTCTGTAAG 62696 || | || || || | ||| ||||| |||| || ||||| || Sbjct 252 GTTTCACCTATTTACAAAGACGGTAAAATTGTCGAATTTCAATCTGTCAG 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330832347710782