Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq8042 356 3e-93 seq9616 269 3e-67 seq15666 217 2e-51 seq10300 159 4e-34 seq9663 105 8e-18 seq15657 91.5 2e-13 seq15095 84.2 3e-11 seq257 84.2 3e-11 seq15682 82.4 9e-11 seq15395 82.4 9e-11 seq10434 82.4 9e-11 >seq8042 Length=962 Score = 356 bits (394), Expect = 3e-93 Identities = 633/912 (69%), Gaps = 25/912 (3%) Strand=Plus/Minus Query 186069 GGCACAACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGT 186128 |||||||| ||||| || || ||| || || || ||||| || ||| | || || Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 186129 GCTAATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTT 186188 ||| ||| | || |||||||| || || ||| | ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 186189 CTACTTTGGGGTCCTGAGTCTCAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTC 186248 ||| | ||||| || || | ||||| || | | | || |||| ||| ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAAC---ACTTATGGG-CTC 787 Query 186249 T----GGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACA 186304 | ||| || | | | ||| | |||||| | ||||| || | | || Sbjct 786 TTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTTTGTTTAAGGCA 727 Query 186305 GTTTGAAATCAGTCGTCTC-GTAGGTATCCGTCCATACAATGCCATTGCTTTTTCTGGTC 186363 |||||| || || | || || |||| ||||| |||||||| | || || | || | Sbjct 726 GTTTGAGAT-AGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGCC 668 Query 186364 CTATCG--CTGTCTTTGTTAGTGTATTCCTCATCTACCCTCTTGGACAGTCCTCATGGTT 186421 |||| || | | | ||||| || |||| |||||| | || || ||||| ||||| Sbjct 667 CTATAATACTATACATATCAGTGT--TCGTCATTTACCCTTTAGGTCAATCCTCTTGGTT 610 Query 186422 CTTCGCTCCCTCCTTTGGAGTCGCAGCAATCTTTAGATTCCTGTTGTTCCTCCAAGGATT 186481 ||| || || || |||||| ||||| ||||| || ||||| | ||||| ||||| || Sbjct 609 CTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTT 550 Query 186482 CCACAACTGGACGTTGAATCCATTCCACATGATGGGTGTAGCAGGTATCCTTGGTGGTGC 186541 ||||| ||||| | || |||||||| |||||||| ||||||| ||| | || | || Sbjct 549 TCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGC 490 Query 186542 TCTGCTGTCAGCAATCCATGGTGTTACTGTAGAAAATACTCTTTATGAAGATGGCGAACA 186601 ||| | ||||| || ||||||| || |||| || ||| | ||| ||||||| || Sbjct 489 TCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGT---CA 433 Query 186602 AGCAAACACA---TTCAAAGCATTCGATACGACGCAAGAAGAAGAAACCTATTCGATGGT 186658 ||| ||||| |||| | ||||| | | |||||| || || || || || ||| | Sbjct 432 AGCTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCT 373 Query 186659 CACTGCGAACAGATTCTGGTCACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCT 186718 || || || ||||||||||| || | ||||| | || ||| ||||||| | ||||| Sbjct 372 AACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCT 313 Query 186719 TCATTTCTTCATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTCTTCCATTGGCATTAT 186778 ||| |||||| | || || || || || || | ||||||||||| || || || || Sbjct 312 TCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAAT 253 Query 186779 TGGTCTTGCTCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGA 186838 || || || | |||||| | || ||||||||| || |||||| || | || ||||| Sbjct 252 AGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGA-GTAAAGGCTGCAGA 194 Query 186839 GGATCCTGAGTTCGAGACGTTCTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGC 186898 ||| || ||||| ||||| |||||||| ||||| || ||| | ||||||||| | ||| Sbjct 193 GGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTT 134 Query 186899 CTGGATGGCA--CCAGTGGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTG 186956 ||||||||| ||| || ||||| ||||| ||||| ||| ||||| ||||| | Sbjct 133 ATGGATGGCAGTCCA--AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTT 76 Query 186957 CCAAGAGGCAAC 186968 |||||||||||| Sbjct 75 CCAAGAGGCAAC 64 >seq9616 Length=845 Score = 269 bits (298), Expect = 3e-67 Identities = 385/542 (71%), Gaps = 0/542 (0%) Strand=Plus/Plus Query 183637 GGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCACCTTTAACTATATG 183696 || ||||| ||| |||||||||||||| || ||||| ||||| ||||| |||| |||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 183697 CTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGTGTCGCT 183756 | || ||||||||||| |||| ||| | ||||| || |||||||| | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 183757 GGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCCTCGCTG 183816 | ||| ||||| || ||||| |||||||| ||||| || || |||| ||||| || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 183817 GTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 183876 || || || || ||| | |||| || | || || | ||||| || | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 183877 GAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGATCTTCCAGTATGCT 183936 ||||| || | ||| || || ||||||||||||||| | || || |||||||| | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 183937 TCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGCCAGTGGTCGGCATC 183996 |||||||| || | | ||||||||||| || || |||||||| | || || Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 183997 TGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATGGTTTTAACTTCAAC 184056 ||||| || |||| || || || ||||| |||||| | |||||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 184057 CAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAGACGTTCTCAACCGT 184116 | || | | || |||||| | | | ||||| ||||| ||| | || || | Sbjct 428 GAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGA 487 Query 184117 GCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTT 184176 || | || || |||||||| ||||| ||| | ||||| ||||||||||| || || || Sbjct 488 GCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTA 547 Query 184177 GC 184178 || Sbjct 548 GC 549 >seq15666 Length=534 Score = 217 bits (240), Expect = 2e-51 Identities = 368/531 (69%), Gaps = 3/531 (1%) Strand=Plus/Plus Query 183637 GGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCACCTTTAACTAT-AT 183695 || ||||| ||| |||||||||||||| || ||||| ||||| ||||| |||| | || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 183696 GCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGTGTCGC 183755 | | || ||||||||||| |||||||| | |||||||| |||||||| | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 183756 TGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCCTCGCT 183815 | ||| || || || ||||| |||||||| ||||| || || |||| ||||| || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 183816 GGTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGA 183875 || || || || ||| | |||| || | || || | | | || || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 183876 AGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGATCTTCCAGTATGC 183935 ||||| || | ||| || || ||||||||||||||| | | || |||||||| | Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 183936 TTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGCCAGTGGTCGGCAT 183995 | |||||||| || | || ||||||||||| || || |||||||| | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 183996 CTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATGGTTTTAACTTCAA 184055 ||||| || |||| || | || ||||| |||||| | |||| | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 184056 CCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAGACGTTCTCAACCG 184115 | || | | || ||| || | | | ||||| ||||| ||| | || || | Sbjct 422 TGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAG 481 Query 184116 TGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCC 184166 || | || || |||||||| ||||| ||| | ||||| ||| ||||||| Sbjct 482 AGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 159 bits (176), Expect = 4e-34 Identities = 284/413 (69%), Gaps = 1/413 (0%) Strand=Plus/Minus Query 183766 GGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAA 183825 || || ||||| |||||||| ||||| || || |||| ||||| || || || || Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGAG 650 Query 183826 ACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTAC 183885 || || ||| | |||| || | || || | ||||| || || || ||||| || Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 183886 AACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGATCTTCCAGTATGCTTCGTTTAAC 183945 | ||| || || ||||||||||||||| | || || ||||| || | | |||||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 183946 AATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGCCAGTGGTCGGCATCTGGTTTACT 184005 || || | ||| ||||||||||| || || |||||||| | || || ||||| || Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 184006 GCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATGGTTTTAACTTCAACCAGTCCATC 184065 |||| || || || ||| | |||||| | ||||| | |||||||| | || | Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 184066 ATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTT 184125 | || |||||| | | | ||||| ||||| ||| | || || | || | || Sbjct 409 GTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTA 350 Query 184126 GGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGC 184178 || |||||||| ||||| ||| | ||||| ||| ||||||| || || || || Sbjct 349 GGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq9663 Length=843 Score = 105 bits (116), Expect = 8e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 183604 GCTGCAACCGCTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATG 183663 || ||| | || || ||| | || || ||| | || ||||| ||| |||||||||||| Sbjct 208 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 267 Query 183664 CCCCTGGGTATCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATC 183723 || || ||||| ||||| |||||||||| || | | || | |||||| || |||||||| Sbjct 268 CCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATG 327 Query 183724 CTGATGCACCCCTTCCAC 183741 || ||||||| |||||| Sbjct 328 CTCGTGCACCCATTCCAC 345 >seq15657 Length=537 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 183604 GCTGCAACCGCTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATG 183663 || ||| | || || ||| | || || ||| | || ||||| ||| |||||||||||| Sbjct 23 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 82 Query 183664 CCCCTGGGTATCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACA 183718 || || ||||| ||||| ||||| |||| |||| | || ||||||||||| |||| Sbjct 83 CCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACA 137 >seq15095 Length=563 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 183640 CAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCACCTTTAACTATATGCTT 183699 ||||| ||| |||||||||||||| || ||||| ||||| |||||||||| |||| | Sbjct 376 CAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTTAACTTTATGTTA 435 Query 183700 GTCTTCCAAGCAGAGCACA 183718 || ||||||||||| |||| Sbjct 436 GTATTCCAAGCAGAACACA 454 >seq257 Length=11404 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 19284 TGAGGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTC 19343 |||| ||| ||||||||||||||||||||||| ||||||||||| ||| | || |||||| Sbjct 219 TGAGCGGTTGTAGCTCAGTTGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTC 278 Query 19344 AAGTCCCATCTATCCCGCC 19362 || ||| || | | |||| Sbjct 279 GAGCCCCGTCAACCGCGCC 297 >seq15682 Length=534 Score = 82.4 bits (90), Expect = 9e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 183604 GCTGCAACCGCTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATG 183663 || ||| | || || ||| | || || | | | || ||||| ||| |||||||||||| Sbjct 523 GCAGCATCAGCAGTATTCATTGTTTACCTTATAGGACAAGGAAGTTTCAGTGATGGTATG 464 Query 183664 CCCCTGGGTATCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACA 183718 || || ||||| ||||| ||||| |||| | || | || ||||||||||| |||| Sbjct 463 CCACTAGGTATTAGTGGAACCTTCAACTTTCTGTTAGTATTCCAAGCAGAACACA 409 >seq15395 Length=548 Score = 82.4 bits (90), Expect = 9e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 183604 GCTGCAACCGCTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATG 183663 || ||| | || || ||| | || || ||| | || ||||| ||| |||||||||||| Sbjct 547 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 488 Query 183664 CCCCTGGGTATCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACA 183718 || || ||||| ||||| |||||||||| || | | || | |||||| || |||| Sbjct 487 CCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACA 433 >seq10434 Length=795 Score = 82.4 bits (90), Expect = 9e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 183604 GCTGCAACCGCTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATG 183663 || ||| | || || ||| | || || ||| | || ||||| ||| |||||||||||| Sbjct 449 GCAGCATCAGCAGTATTCATTGTTTACCCTGTAGGACAAGGAAGTTTCAGTGATGGTATG 390 Query 183664 CCCCTGGGTATCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACA 183718 || || ||| | ||||| ||||| ||| |||| | || ||||||||||| |||| Sbjct 389 CCACTAGGTGTAAGTGGAACCTTCTACTTTATGTTAGTATTCCAAGCAGAACACA 335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621941499237240