Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq8042 351 1e-91 seq9616 223 4e-53 seq15666 188 8e-43 seq10300 147 2e-30 >seq8042 Length=962 Score = 351 bits (388), Expect = 1e-91 Identities = 639/921 (69%), Gaps = 27/921 (3%) Strand=Plus/Minus Query 165261 GGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT 165320 || || || || ||||| |||||| || || || | || || || || | || || Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 165321 GCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTG 165380 |||||| | || || |||||| || ||||| | ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 165381 CTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTC 165440 || | ||||| || || | ||||| | || | | || |||| ||| ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAAC---ACTTATGGG-CTC 787 Query 165441 T----GGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTC-GCC 165495 | |||| || | | | ||| | ||||||| ||||||| || || || | | Sbjct 786 TTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGGC 728 Query 165496 AGTTTGAACTGGCACGACTTA-TCGGTATTCGTCCTTACAATGCTATTGCTTTCTCTGGT 165554 ||||||| | || | |||| || |||| ||||| ||||||||| | || ||| | || Sbjct 727 AGTTTGAGATAGCCAG-CTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGC 669 Query 165555 CCTAT--TGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGGACAATCGTCCTGGT 165612 ||||| | || || | |||||| || || || ||| | || ||||| || |||| Sbjct 668 CCTATAATACTATACATATCAGTGTTCGTC--ATTTACCCTTTAGGTCAATCCTCTTGGT 611 Query 165613 TCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGT 165672 |||| ||||| | || || ||||| |||||| | ||||| || ||||| ||||| | Sbjct 610 TCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCT 551 Query 165673 TCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGGTATCTTAGGCGGAG 165732 | || || ||||| || || || || || |||||||| ||||||| ||||| || | || Sbjct 550 TTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAG 491 Query 165733 CATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAAC 165792 | | | || || || ||||||| ||||||| || ||| | ||| |||||||| | Sbjct 490 CTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGT---C 434 Query 165793 AAGCAAACACT---TTCAAAGCATTTGATAGTACTCAGGAAGAGGAAACTTATTCCATGG 165849 |||| |||| |||| | |||| | || || ||||| ||||| || ||| Sbjct 433 AAGCTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGC 374 Query 165850 TCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGC 165909 | || ||||| | ||||||||||| | | || | || || ||||||| | |||| Sbjct 373 TAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGC 314 Query 165910 TTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCA 165969 |||||||||| | || || || || || ||| | ||||| |||||| || || | Sbjct 313 TTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAA 254 Query 165970 TTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCTGCTG 166029 | || || ||| |||| ||| | || ||||| ||| | ||||||||| || ||||| | Sbjct 253 TAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAGTAAAG-GCTGCAG 195 Query 166030 AGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATGAAGGACTCCGTG 166089 |||| ||||||||||| || |||||||| || ||||| || ||||||||||| ||||| Sbjct 194 AGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTT 135 Query 166090 CCTGGTTGGC--TCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAAGTCTT 166147 ||| |||| ||| ||| ||||||||||||||||| |||||||| ||||| | Sbjct 134 TATGGATGGCAGTCCA--AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACT 77 Query 166148 GCCAAGAGGCAACGCACTTTA 166168 |||||||||||| |||| || Sbjct 76 TCCAAGAGGCAACTCACTATA 56 >seq9616 Length=845 Score = 223 bits (246), Expect = 4e-53 Identities = 377/544 (69%), Gaps = 4/544 (1%) Strand=Plus/Plus Query 164369 GGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGAACCTTCAACTACATG 164428 || ||||| |||| ||||| ||||| || || || |||||||||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 164429 TTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACCCCTTCCATATGCTCGGCGTAGCA 164488 || || ||||| || || |||| ||| | ||||| || ||||| || | || |||||| Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 164489 GGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACTTCTTCGCTG 164548 | ||| || || || ||||| |||||||| ||||| || || |||| ||||| || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 164549 GTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGAA 164608 || ||||| | | | | || | || | || || | || || ||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 164609 GAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAATACGCT 164668 || || || | ||| || || || || ||||||||| | || || ||||| ||| | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 164669 TCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATC 164728 ||| |||||||| | | ||||||||||| ||||||||||| || | ||||| Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 164729 TGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAAC 164788 ||||| || |||| || || || ||||| || ||| | || ||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 164789 CAGTCCATCATCGATGGTCAG--GGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACC 164846 | || | | || |||| |||| | | | ||||| ||||| ||| | || || Sbjct 428 GAATCACTTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATA 485 Query 164847 GTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACC 164906 | || | || || |||||||| ||||| ||| | ||||| ||||||||||| || || | Sbjct 486 GAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATC 545 Query 164907 TTGC 164910 | || Sbjct 546 TAGC 549 >seq15666 Length=534 Score = 188 bits (208), Expect = 8e-43 Identities = 364/533 (68%), Gaps = 7/533 (1%) Strand=Plus/Plus Query 164369 GGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGAACCTTCAACTAC-AT 164427 || ||||| |||| ||||| ||||| || || || |||||||||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 164428 GTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACCCCTTCCATATGCTCGGCGTAGC 164487 ||| || ||||| || || |||||||| | |||||||| ||||| || | || ||||| Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 164488 AGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACTTCTTCGCT 164547 || ||| ||||| || ||||| |||||||| ||||| || || |||| ||||| || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 164548 GGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGA 164607 || ||||| | | | | || | || | || || | | || ||||| || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 164608 AGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAATACGC 164667 || || || | ||| || || || || ||||||||| | | || ||||| |||| Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 164668 TTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTAT 164727 | ||| |||||||| | || ||||||||||| ||||||||||| || | ||||| Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 164728 CTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAA 164787 ||||| || |||| || | || ||||| || ||| | || | | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 164788 CCAGTCCATCATCGATGGTCAG--GGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAAC 164845 | || | | || |||| | || | | | ||||| ||||| ||| | || || Sbjct 422 TGAATCACTTGTAGA--CTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAAT 479 Query 164846 CGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCC 164898 | || | || || |||||||| ||||| ||| | ||||| ||| ||||||| Sbjct 480 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 147 bits (162), Expect = 2e-30 Identities = 284/416 (68%), Gaps = 5/416 (1%) Strand=Plus/Minus Query 164497 TGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGA 164556 ||| || ||||| |||||||| ||||| || || |||| ||||| || || || || Sbjct 709 TGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGA 651 Query 164557 GACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTA 164616 ||| | | | | || | || | || || | || || ||||| || || || || Sbjct 650 GACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATA 591 Query 164617 CAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAA 164676 | ||| || || || || ||||||||| | || || |||||||||| | ||| || Sbjct 590 TAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAA 531 Query 164677 CAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTAC 164736 |||||| | || ||||||||||| ||||||||||| || | ||||| ||||| || Sbjct 530 CAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCAC 471 Query 164737 TGCTCTGGGCGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCAT 164796 |||| || || || ||| | || ||| | || || | |||||||| | || | Sbjct 470 CTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACT 411 Query 164797 CATCGATGGTCAG--GGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGT 164854 | || |||| |||| | | | ||||| ||||| ||| | || || | || | Sbjct 410 TGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGAC 353 Query 164855 CTGGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGC 164910 || || |||||||| ||||| ||| | ||||| ||| ||||||| || || || || Sbjct 352 CTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557538847037640