Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq10619 93.3 3e-14 seq13573 84.2 1e-11 >seq10619 Length=779 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/196 (71%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 70302 AGATTAAAACTAATCCAAATAGCCGTCGTATGATTGTCACGGGGTGGAA---CCCTCATG 70358 |||| ||||| || || | |||||||| || |||| | ||||| | || ||| Sbjct 221 AGATCAAAACCAACCCGGACAGCCGTCGACATATCGTCAGTGCCTGGAATGTCGCTGATG 280 Query 70359 AGATTGAAGATGTAGACCTTCCACCATGTCATACACTATTCCAATTCTTTGTGGAAGATG 70418 |||| | | | | ||| || ||||| ||| || || || |||| ||||| || | Sbjct 281 ---TTGATGGTATGGCCCTGCCGCCATGCCATTGCCTGTTTCAGTTCTATGTGGCTGACG 337 Query 70419 GTAAGCTTTCTTGCCAGCTATATCAACGTAGTGCTGACATTTTACTTGGTGTGCCATTCA 70478 | |||||||| || ||||| || || || ||||| || || || || || ||||| |||| Sbjct 338 GCAAGCTTTCGTGTCAGCTCTACCAGCGCAGTGCCGATATCTTTCTGGGGGTGCCCTTCA 397 Query 70479 ATATTGCATCATATGC 70494 ||||||| || ||||| Sbjct 398 ATATTGCCTCCTATGC 413 >seq13573 Length=635 Score = 84.2 bits (92), Expect = 1e-11 Identities = 163/238 (68%), Gaps = 7/238 (3%) Strand=Plus/Plus Query 70270 GGGT-ATTGATCAGATCGAGTGGGTAATTAATGAGATTAAAACTAATCCAAATAGCCGTC 70328 |||| |||||||| || ||||||| | | ||||||||||| |||||||| || | Sbjct 128 GGGTGATTGATCAAATTCAGTGGGTGTTAGACGAGATTAAAACCAATCCAAACTCGCGGC 187 Query 70329 GTATGATTGTCACGGGGTGGAACCCTCATGAGATTGAAGATGTAGACCTTCCACCATGTC 70388 || || | ||| | | ||||| || ||| | ||| | | || || ||||| | Sbjct 188 GTTTGGTCGTCTCTGCTTGGAATCCGGCTGACGTGCCCGATATGGCGCTGCCGCCATGCC 247 Query 70389 ATACACTATTCCAATT---CTTTGTGGAAGATGGTAAGCTTTCTTGCCAGCTATATCAAC 70445 | || || || || | || || || || ||||| ||| ||||| ||||||| Sbjct 248 ACTGCCTGTTTCAGTTTAACGTTATG---GACGGAAAGCTAAATTGTCAGCTCTATCAAC 304 Query 70446 GTAGTGCTGACATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCCTTACTTAC 70503 || ||||| | || |||||||| || |||||||| ||||| ||||| || || || Sbjct 305 GTTCGGCTGATGTCTTCCTTGGTGTCCCGTTCAATATCGCATCCTATGCTTTGCTGAC 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335506603169899