Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq8042 327 1e-84 seq9616 235 7e-57 seq15666 190 2e-43 seq10300 145 9e-30 seq15657 100 3e-16 seq15682 91.5 2e-13 seq10434 91.5 2e-13 seq433 91.5 2e-13 seq15444 86.0 7e-12 seq15004 86.0 7e-12 seq8743 86.0 7e-12 seq2124 86.0 7e-12 seq14884 82.4 9e-11 seq14874 82.4 9e-11 >seq8042 Length=962 Score = 327 bits (362), Expect = 1e-84 Identities = 479/673 (71%), Gaps = 11/673 (2%) Strand=Plus/Minus Query 179179 GGCAGTTTGAAATCGCACGTCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTG 179238 |||||||||| || || | ||||| |||| ||||| |||||||| | || || | | Sbjct 730 GGCAGTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAG 671 Query 179239 GTCCAATTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGT 179298 | || || | | | || || || |||| || ||| | || || ||||| |||| Sbjct 670 GCCCTATAATACTATACATATCAGTGTTCGTCATTTACCCTTTAGGTCAATCCTCTTGGT 611 Query 179299 TCTTTGCGCCGTCGTTTGGAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCT 179358 ||||||| || | |||||||||||| || ||| | ||||| || |||||||| |||| Sbjct 610 TCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCT 551 Query 179359 TCCACAACTGGACGCTCAACCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAG 179418 | ||||| ||||| || ||||| ||||| |||||||| ||||||| ||| |||| | || Sbjct 550 TTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAG 491 Query 179419 CATTGCTTTGTGCCATTCATGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACC 179478 | | | | || || |||||||| ||||||| ||||| | | | |||| || | Sbjct 490 CTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGA---TGGTC 434 Query 179479 AATCAAATACA---TTCAAGGCATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGG 179535 || | | ||| |||| ||||| || || ||| |||||||| || || ||| Sbjct 433 AAGCTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGC 374 Query 179536 TTACTGCCAACCGTTTCTGGTCTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGC 179595 | || || || | ||||||||||| | | || | || || ||||||| | |||| Sbjct 373 TAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGC 314 Query 179596 TACATTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTA 179655 | || ||||| | | || || || || || | ||||||||| || || || | Sbjct 313 TTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAA 254 Query 179656 TTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAG 179715 | || || ||| | ||||||||||| ||||||||| | || || ||| | | || |||| Sbjct 253 TAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAG 195 Query 179716 AGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTG 179775 |||| || ||||| ||||| |||||||| |||||||| ||| | ||||||||| | ||| Sbjct 194 AGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTT 135 Query 179776 CTTGGATGGCA--CCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATT 179833 ||||||||| ||| || ||||| ||||| ||||| ||| ||||| |||||| | Sbjct 134 TATGGATGGCAGTCCA--AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACT 77 Query 179834 GCCAAGAGGCAAC 179846 |||||||||||| Sbjct 76 TCCAAGAGGCAAC 64 >seq9616 Length=845 Score = 235 bits (260), Expect = 7e-57 Identities = 383/546 (70%), Gaps = 8/546 (1%) Strand=Plus/Plus Query 178039 GGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATG 178098 || ||||| |||| ||| | |||||| || ||||| ||||| |||||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 178099 CTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCT 178158 | || ||||||||||| |||| ||| | ||||| || |||||||| || || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 178159 GGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTG 178218 | ||| || || || ||||| |||||||| ||||| || || |||| ||||| || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 178219 GTTCGTGAAACCACCGAGAACGAAAGTCAG--AACTATGGTTACAAGTTCGGTCAAGAAG 178276 || || || || || | || ||| || | || || | ||||| || | | Sbjct 188 CTTGCAGAGAC-ACTTGGATCTAAC-TCACTCAATTCAGGCTATATATTCGGACAGTAGG 245 Query 178277 AAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACG 178336 | ||||| || | ||| || || ||||| ||||| ||| | || || ||||| ||| Sbjct 246 ATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACA 305 Query 178337 CATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTA 178396 ||| |||||||| | | ||||||||||| ||||||||||| || | |||| Sbjct 306 GTAGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTA 365 Query 178397 TCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCA 178456 | |||||||| |||| || || || ||||| || ||| | || ||| | ||||||| Sbjct 366 TATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCA 425 Query 178457 ACCAGTCCATCATGGATAGTCAG--GGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAA 178514 || | || | || | | |||| || | | | ||||| ||||| ||| | || || Sbjct 426 ACGAATC--ACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAA 483 Query 178515 CCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGA 178574 | || | || ||||||||||| ||||| ||| | ||||| ||||||||||| || || Sbjct 484 TAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGA 543 Query 178575 CCTCGC 178580 || || Sbjct 544 TCTAGC 549 >seq15666 Length=534 Score = 190 bits (210), Expect = 2e-43 Identities = 368/535 (69%), Gaps = 11/535 (2%) Strand=Plus/Plus Query 178039 GGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTAC-AT 178097 || ||||| |||| ||| | |||||| || ||||| ||||| |||||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 178098 GCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGC 178157 | | || ||||||||||| |||||||| | |||||||| |||||||| || || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 178158 TGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCT 178217 | ||| ||||| || ||||| |||||||| ||||| || || |||| ||||| || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 178218 GGTTCGTGAAACCACCGAGAACGAAAGTCA--GAACTATGGTTACAAGTTCGGTCAAGAA 178275 || || | ||| || | || ||| || | || || | | | || || Sbjct 184 ACTTGCAGAGA-CACTTGGATC-TAACTCACTCAATTCAGGCTATATATGTGAACAGGAG 241 Query 178276 GAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATAC 178335 || ||||| || | ||| || || ||||| ||||| ||| | | || ||||| ||| Sbjct 242 GATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTAC 301 Query 178336 GCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGT 178395 | ||| |||||||| | || ||||||||||| ||||||||||| || | ||| Sbjct 302 GGTAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGT 361 Query 178396 ATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTC 178455 || |||||||| |||| || | || ||||| || ||| | || | | | || Sbjct 362 ATATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTC 419 Query 178456 AACCAGTCCATCATGGATAGTCAG--GGCAAAGTCCTGAACACCTGGGCAGACGTTCTCA 178513 || | || | || | | |||| | | | | ||||| ||||| ||| | || | Sbjct 420 AATGAATC--ACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTA 477 Query 178514 ACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCC 178568 | | || | || ||||||||||| ||||| ||| | ||||| ||| ||||||| Sbjct 478 ATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 145 bits (160), Expect = 9e-30 Identities = 287/418 (69%), Gaps = 9/418 (2%) Strand=Plus/Minus Query 178167 TGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGA 178226 ||| || ||||| |||||||| ||||| || || |||| ||||| || || || || Sbjct 709 TGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGA 651 Query 178227 AACCACCGAGAACGAAAGTCAG--AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 178284 || || || | || ||| || | || || | ||||| || || || ||||| Sbjct 650 GAC-ACTTGGATCTAAC-TCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACA 593 Query 178285 TACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTC 178344 || | ||| || || ||||| ||||| ||| | || || |||||||||| ||| Sbjct 592 TATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTT 533 Query 178345 AACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTC 178404 |||||||| | || ||||||||||| ||||||||||| || | ||||| |||||| Sbjct 532 AACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTC 473 Query 178405 ACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCC 178464 || |||| || || || ||| | || ||| | || || | |||||||| | || Sbjct 472 ACCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATC- 414 Query 178465 ATCATGGATAGTCAG--GGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTG 178522 | || | | |||| || | | | ||||| ||||| ||| | || || | || | Sbjct 413 -ACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAG 355 Query 178523 GTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGACCTCGC 178580 || ||||||||||| ||||| ||| | ||||| ||| ||||||| || || || || Sbjct 354 ACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq15657 Length=537 Score = 100 bits (110), Expect = 3e-16 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 178006 GCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATG 178065 |||||||| || |||||| ||||||| ||| | || ||||| |||| ||| | |||| Sbjct 23 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 82 Query 178066 CCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACA 178120 || || ||||| ||||| |||||||||| ||| | || ||||||||||| |||| Sbjct 83 CCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACA 137 >seq15682 Length=534 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 178006 GCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATG 178065 |||||||| || |||||| ||||||| | | | || ||||| |||| ||| | |||| Sbjct 523 GCAGCATCAGCAGTATTCATTGTTTACCTTATAGGACAAGGAAGTTTCAGTGATGGTATG 464 Query 178066 CCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACA 178120 || || ||||| ||||| |||||||||| || | || ||||||||||| |||| Sbjct 463 CCACTAGGTATTAGTGGAACCTTCAACTTTCTGTTAGTATTCCAAGCAGAACACA 409 >seq10434 Length=795 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 178006 GCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATG 178065 |||||||| || |||||| ||||||| ||| | || ||||| |||| ||| | |||| Sbjct 449 GCAGCATCAGCAGTATTCATTGTTTACCCTGTAGGACAAGGAAGTTTCAGTGATGGTATG 390 Query 178066 CCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACA 178120 || || ||| | ||||| |||||| ||| ||| | || ||||||||||| |||| Sbjct 389 CCACTAGGTGTAAGTGGAACCTTCTACTTTATGTTAGTATTCCAAGCAGAACACA 335 >seq433 Length=8178 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 158205 TCGGGGTGTAGCTCAGTTTGGTAGAGCGCCGTCTTTGGGAGGCGGATGCCGTAGGTTCGA 158264 || ||||||||||||| |||||||||||| ||||||||| ||| || | || |||||| | Sbjct 587 TCAGGGTGTAGCTCAGCTTGGTAGAGCGCGGTCTTTGGGTGGCCGAAGTCGCAGGTTCAA 528 Query 158265 ATCCTATCACCCCGACTT 158282 ||||| |||||| ||||| Sbjct 527 ATCCTGTCACCCTGACTT 510 >seq15444 Length=545 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 178006 GCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATG 178065 |||||||| || |||||| ||||||| ||| | || ||||| |||| ||| | |||| Sbjct 263 GCAGCATCAGCAGTATTCATTGTTTACCCTGTAGGACAAGGAAGTTTCAGTGATGGTATG 322 Query 178066 CCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACA 178120 || || | | | ||||| |||||| ||| ||| | || ||||||||||| |||| Sbjct 323 CCACTAGCTGTAAGTGGAACCTTCTACTTTATGTTAGTATTCCAAGCAGAACACA 377 >seq15004 Length=563 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 178006 GCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATG 178065 |||||||| || |||||| ||||||| ||| | || ||||| |||| ||| | |||| Sbjct 444 GCAGCATCAGCAGTATTCATTGTTTACCCTGTAGGACAAGGAAGTTTCAGTGATGGTATG 385 Query 178066 CCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACA 178120 || || | | | ||||| |||||| ||| ||| | || ||||||||||| |||| Sbjct 384 CCACTAGCTGTAAGTGGAACCTTCTACTTTATGTTAGTATTCCAAGCAGAACACA 330 >seq8743 Length=905 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 178003 GCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCT 178062 || |||||||| || |||||| ||| | |||| | || ||||| |||| ||| | | Sbjct 104 GCAGCAGCATCAGCAGTATTCAATGTATCTCCTATAGGGCAAGGAAGTTTCAGTGATGGT 163 Query 178063 ATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCAC 178119 ||||| || ||||| ||||| ||||||||| ||| | || ||||||||||| ||| Sbjct 164 ATGCCGCTAGGTATTAGTGGAGCCTTCAACTTTATGTTAGTATTCCAAGCAGAACAC 220 >seq2124 Length=2445 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 17707 GGTTGTAGCTCAGTCGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGAGGGTTCAAGTC 17766 || ||||||||||| |||||||||||| ||||||||||| ||| |||| |||||| |||| Sbjct 1630 GGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTC 1571 Query 17767 CCTTCAGTCCCG 17778 || ||| || || Sbjct 1570 CCGTCACTCGCG 1559 >seq14884 Length=573 Score = 82.4 bits (90), Expect = 9e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 177998 CAGTCGCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGT-CAAGGTTCTTTCTCT 178056 |||| || |||||||| || |||||| ||| | ||| | || ||||| |||| | Sbjct 490 CAGTAGCAGCAGCATCAGCAGTATTCAATGTATC-CCTATAAGTACAAGGAAGTTTCAGT 432 Query 178057 GACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAG 178116 || | |||||| || ||||| ||||| |||||||||| ||| | || ||||||||||| Sbjct 431 GATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAA 372 Query 178117 CACA 178120 |||| Sbjct 371 CACA 368 >seq14874 Length=573 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 17859 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 17918 |||| ||||||||| ||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 499 GGGGCCTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAGCGGTTCGATC 440 Query 17919 CCGCTATTCTCCA 17931 |||||| ||||| Sbjct 439 CCGCTAGGCTCCA 427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596183637694320