Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq8042 306 4e-78 seq9616 183 4e-41 seq15666 147 3e-30 seq10300 147 3e-30 seq9663 82.4 9e-11 >seq8042 Length=962 Score = 306 bits (338), Expect = 4e-78 Identities = 628/918 (68%), Gaps = 27/918 (3%) Strand=Plus/Minus Query 170703 GGCACGACATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGT 170762 ||||| |||||||| ||||||||| || || || | ||||| || ||| | ||||| Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 170763 GCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTT 170822 ||| || | ||||| || || || || ||| || ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 170823 CTACTTTGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTC 170882 ||| | ||||| || || | || || |||| | | || ||| ||| ||| ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGA--ACA-CTTATGGG-CTC 787 Query 170883 T----GGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTTC-GGC 170937 | ||| || | | | ||| | |||||| | ||||| || || || ||| Sbjct 786 TTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGGC 728 Query 170938 AGTTTGAAATCAGTCGTCTC-GTAGGGATTAGACCGTACAATGCAATCGCTTTCTCTGGT 170996 ||||||| || || | || || | || | ||||||||||| | || ||| | || Sbjct 727 AGTTTGAGAT-AGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGC 669 Query 170997 CCTATCG--CTGTGTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGT 171054 ||||| || | | |||| ||||| |||| || ||| | || || || ||||| Sbjct 668 CCTATAATACTATACATATCAG--TGTTCGTCATTTACCCTTTAGGTCAATCCTCTTGGT 611 Query 171055 TCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTT 171114 |||| |||||| || |||||||||||| |||||| | ||||| || ||||| ||||| | Sbjct 610 TCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCT 551 Query 171115 TCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTG 171174 | ||||| ||||| || || ||||| ||||||||||| | ||||| ||| | || | | Sbjct 550 TTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAG 491 Query 171175 CATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATC 171234 | | | || || || ||||||| ||||||| || ||| | ||| ||||||| || Sbjct 490 CTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGG---TC 434 Query 171235 AAGCAAAC---ACCTTTAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGG 171291 |||| || ||||| | |||| | || || || ||||| || |||||| Sbjct 433 AAGCTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGC 374 Query 171292 TCACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGT 171351 | || |||||| | |||||||| || | | || | || || ||||||| | ||| Sbjct 373 TAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGC 314 Query 171352 TGCATTTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTA 171411 | || ||||| | || || || || || || | ||| | | | | || || | Sbjct 313 TTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAA 254 Query 171412 TTGGTCTTGCTCTTAATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAG 171471 | || || || | || ||||| || ||||| || || |||||| || | || |||| Sbjct 253 TAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGA-GTAAAGGCTGCAG 195 Query 171472 AAGATCCAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTG 171531 | || |||||||| ||||| |||||||| |||||||| ||| | ||||||||| | ||| Sbjct 194 AGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTT 135 Query 171532 CATGGATGGCA--CCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCT 171589 |||||||||| ||| ||| ||||| ||||| ||||| ||||| |||||||| || Sbjct 134 TATGGATGGCAGTCCA--AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACT 77 Query 171590 ACCTCGTGGCAATGCACT 171607 || | ||||| |||| Sbjct 76 TCCAAGAGGCAACTCACT 59 >seq9616 Length=845 Score = 183 bits (202), Expect = 4e-41 Identities = 360/528 (68%), Gaps = 6/528 (1%) Strand=Plus/Plus Query 169810 TGACGCTATGCCTCTGGGTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGA 169869 ||| | |||||| || ||||| |||||||| |||| ||| | || |||||||| || Sbjct 25 TGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGA 84 Query 169870 GCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTC 169929 |||| ||| | ||||| || |||||||| | || || || | || || || || || Sbjct 85 ACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATC 144 Query 169930 TCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGA 169989 ||| || || || ||||| || | || ||||| ||| | || || || Sbjct 145 TCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGAC-ACTTG 203 Query 169990 GAACGAG-TCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCG 170048 || | | || | || | || || | ||||| || | || ||||| || | ||| Sbjct 204 GATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATAT 263 Query 170049 TTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCC 170108 || || || || ||||| ||| | || || ||||| ||| | ||| |||||||| Sbjct 264 CAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTTAACAACTCAA 323 Query 170109 GTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTG 170168 | | ||||||||||| ||||||||||| || | || || ||||||||| |||| | Sbjct 324 GAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAG 383 Query 170169 GTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATG 170228 | || || || ||||| || ||| | || ||| | ||||||||| | || | | || Sbjct 384 GAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGA-- 441 Query 170229 GTCAG--GGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCAT 170286 |||| |||| | | | ||||| ||||| ||| | || || | || | || || || Sbjct 442 CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTAT 501 Query 170287 GGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTCGC 170334 |||||| ||||| ||| | ||||| ||||||||||| || || || || Sbjct 502 GGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTAGC 549 >seq15666 Length=534 Score = 147 bits (162), Expect = 3e-30 Identities = 347/517 (67%), Gaps = 9/517 (2%) Strand=Plus/Plus Query 169810 TGACGCTATGCCTCTGGGTATCTCGGGAACCTTTAACTAC-ATGCTGGTCTTCCAAGCTG 169868 ||| | |||||| || ||||| |||||||| |||| ||| | || |||||||| | Sbjct 21 TGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAG 80 Query 169869 AGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGT 169928 | |||||||| | |||||||| |||||||| | || || || | || ||||| || | Sbjct 81 AACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGAT 140 Query 169929 CTCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCG 169988 |||| || || || ||||| || | |||||||| ||| | || || || Sbjct 141 CTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGAC-ACTT 199 Query 169989 AGAACGAG-TCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATC 170047 || | | || | || | || || | | | || || || ||||| || | ||| Sbjct 200 GGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCATA 259 Query 170048 GTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCC 170107 || || || || ||||| ||| | | || ||||| |||| | ||| |||||||| Sbjct 260 TCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTCA 319 Query 170108 CGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTT 170167 | || ||||||||||| ||||||||||| || | || || ||||||||| |||| Sbjct 320 AGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTA 379 Query 170168 GGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGAT 170227 || | || |||||||| || ||| | || | | | |||| | || | | || Sbjct 380 GGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTAGA- 436 Query 170228 GGTCAG--GGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCA 170285 |||| | || | | | ||||| ||||| ||| | || || | || | || || | Sbjct 437 -CTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTA 495 Query 170286 TGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCC 170322 ||||||| ||||| ||| | ||||| ||| ||||||| Sbjct 496 TGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 147 bits (162), Expect = 3e-30 Identities = 225/319 (71%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 170018 TTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTG 170077 ||||| || || || ||||| || | ||| || || || || ||||| ||| | || Sbjct 613 TTCGGACAGGAGGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTA 554 Query 170078 ATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGG 170137 || |||||||||| | ||| |||||||| | || ||||||||||| ||||||||| Sbjct 553 ATATTCCAATACGGTAGCTTTAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGG 494 Query 170138 CCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAAC 170197 || || | || || ||||||||| |||| || || || || ||| | || ||| | || Sbjct 493 CCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAAT 434 Query 170198 GGTTTCAACTTCAACCAGTCCATCATCGATGGTCAG--GGTCGTGTGCTCAACACCTGGG 170255 || | |||||||| | || | | || |||| |||| | | | ||||| |||| Sbjct 433 GGCCTGAACTTCAATGAATCACTTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGG 376 Query 170256 CAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACA 170315 | ||| | || || | || | || || |||||||| ||||| ||| | ||||| ||| Sbjct 375 CCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACG 316 Query 170316 ACTTCCCTCTCGACCTCGC 170334 ||||||| || || || || Sbjct 315 ACTTCCCACTAGATCTAGC 297 >seq9663 Length=843 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 169760 GCAGCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATG 169819 ||||| || || || ||| | || ||||| | || ||||| ||| ||| | |||| Sbjct 208 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 267 Query 169820 CCTCTGGGTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATC 169879 || || ||||| ||||||||||||| | | | || | |||||| || |||||||| Sbjct 268 CCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATG 327 Query 169880 CTCATGCACCCCTTCCAC 169897 ||| ||||||| |||||| Sbjct 328 CTCGTGCACCCATTCCAC 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592075689089040