Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2058 120 6e-22 seq1048 114 3e-20 seq9020 102 2e-16 seq1961 102 2e-16 seq5213 98.7 2e-15 seq13385 96.9 7e-15 >seq2058 Length=2488 Score = 120 bits (132), Expect = 6e-22 Identities = 110/139 (79%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 301406 GCTTAAAGATAGCGATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGA 301465 |||||||| | | || || ||| | |||||||| || |||||||| ||||| || |||| Sbjct 391 GCTTAAAGGTTACCATCCTCAAACTTGACCCCTACATTAACGTCGACCCGGGCACCATGA 450 Query 301466 GCCCGACTCAACATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATC 301525 |||| | ||| || || |||||||| || || || || ||||||||||||||||| |||| Sbjct 451 GCCCTATTCAGCACGGTGAAGTGTTTGTTACCGAAGACGGTGCTGAAACCGATCTTGATC 510 Query 301526 TGGGGCACTACGAACGTTT 301544 | || || ||||| || || Sbjct 511 TTGGCCATTACGAGCGGTT 529 >seq1048 Length=4263 Score = 114 bits (126), Expect = 3e-20 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 301430 TGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGT 301489 ||||||||||| ||||||| ||||| || |||||||||||| | |||| || ||||||| Sbjct 472 TGGACCCCTATCTCAACGTTGATCCCGGCACGATGAGCCCGTTTGAACACGGCGAAGTGT 413 Query 301490 TCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547 ||||||| || || || || || ||||| ||||||| || ||||| || || ||||| Sbjct 412 TCGTGACAGACGACGGCGCCGAGACCGACTTGGATCTTGGCCACTATGAGCGGTTCAC 355 >seq9020 Length=885 Score = 102 bits (112), Expect = 2e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491 || |||||| | |||||||||||||||||||||||||| ||| ||||| || || | Sbjct 117 GATCCCTATCTGAACGTCGATCCGGGGACGATGAGCCCCTATCAGCATGGCGAGGTCTAT 58 Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547 || || ||||| || || || ||||| || ||| |||| ||||||||||| || || Sbjct 57 GTCACCGATGACGGGGCAGAGACCGACCTTGATTTGGGTCACTACGAACGCTTTAC 2 >seq1961 Length=2601 Score = 102 bits (112), Expect = 2e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491 ||||| || | ||||||||||| || |||||| ||| | ||||| || |||||| Sbjct 421 GACCCATACTTGAACGTCGATCCCGGCACGATGTCACCGTTCGAGCATGGCGAGGTGTTC 480 Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547 ||||| || ||||| || |||||||| || |||||||| ||||||||||| ||||| Sbjct 481 GTGACCGACGATGGCGCGGAAACCGACCTTGATCTGGGCCACTACGAACGCTTCAC 536 >seq5213 Length=1276 Score = 98.7 bits (108), Expect = 2e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 301421 TGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATG 301480 ||| ||| | || || ||| | || |||||||| || ||||||||||| ||||| | Sbjct 734 TGCGTAAGCTTGATCCGTATTTGAATGTCGATCCAGGCACGATGAGCCCACGCCAACACG 675 Query 301481 GAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAAC 301540 | || || || ||||| |||||||| ||||| || ||||| ||||| || ||||| |||| Sbjct 674 GCGAGGTATTTGTGACCGATGATGGCGCTGAGACTGATCTCGATCTTGGTCACTATGAAC 615 Query 301541 GTTTCAC 301547 | ||||| Sbjct 614 GCTTCAC 608 >seq13385 Length=643 Score = 96.9 bits (106), Expect = 7e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491 || |||||| | |||||||| || || || ||||||||| | ||||| ||||| ||| Sbjct 108 GATCCCTATCTGAACGTCGACCCCGGAACCATGAGCCCGTTCGAGCATGGCGAAGTCTTC 167 Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547 || || ||||| ||||| || ||||| || ||||| || ||||||||||| || || Sbjct 168 GTCACCGATGACGGTGCCGAGACCGACCTAGATCTTGGCCACTACGAACGCTTTAC 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046516880117358