Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq167 91.5 2e-13 >seq167 Length=324310 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||||| |||| ||||| ||||| | || || ||||||||||| | ||||||||| | Sbjct 152489 AAAAATGTAAATCTTCGTTAAAACCTTAACCGGAAAAACCATCACTTTGGACGTCGAATC 152548 Query 40746 CACCGAC-AGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | | ||| || ||||| |||| | ||||| | |||||||| || |||||| | | Sbjct 152549 CTCTGACTCTATTGAAAACG-TCAAAGCTAAAATCCAAGACAAAGAAGGAATCCCCCCTG 152607 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 |||| || || | || | ||| || ||| | | || |||| | ||| | || | Sbjct 152608 ACCAATAAAGATTAATTTTCGCTGGAAAATAATTAGAAGACGGAAGAACCTTATCTGATT 152667 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||| | || || |||| | ||| |||| || | ||||| || || Sbjct 152668 ACAACATTTAAAAAGAATCCACCTTACATTTAGTCTTAAGATTGAGAGGAGG 152719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217345210880