Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq88 132 3e-26 >seq88 Length=166103 Score = 132 bits (146), Expect = 3e-26 Identities = 252/367 (69%), Gaps = 8/367 (2%) Strand=Plus/Plus Query 97155 AGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGA 97214 |||||| ||||| || || || |||||||||||| ||||||| ||||| |||| || Sbjct 90044 AGCAATATTAAAGGGAACTCCAAGTCCCATATCACAAGATCTTTAGTATAAAAGACATGA 90103 Query 97215 AAGCTTTCCATCACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTT 97274 | ||||||||| ||||| |||| ||| |||||||| || || || |||||||| Sbjct 90104 TAATTTTCCATCATTAACATAGAACTATGCCAAAACATGACAAGGAGGTAAAGCCATTTT 90163 Query 97275 TGGAACATCTAAGACATTCCAAGCACACATCAACAT-TCTTCT---ATCGGTTGGGTTTG 97330 || | || || ||||| ||||| | || || |||||| ||| ||| || Sbjct 90164 AGGGATGTCAGAGGGGTTCCATGCACAGA-AAATATGTCTTCTGGAATC---TGGATTAT 90219 Query 97331 TGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCT 97390 | | | |||||||| | |||| || || || |||| ||| | |||||| | Sbjct 90220 TTTTCAATTAATTAATTAAATTTTTTATTTAGTCGACACCTTATCCTTCGTAATTGGTGT 90279 Query 97391 TAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGT 97450 | | ||| ||||| || || ||||| ||||||| |||||||||| || || | | Sbjct 90280 GCATATCTTTGTATTCGGCGCCGAAATGTCTCCATTAAAATCCATAAATTGGCCCTAAAT 90339 Query 97451 CTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCAT 97510 | |||||| || || ||||| | ||||||||| | ||| ||||||| | | Sbjct 90340 CATTTTCTTCCCTGTCTTTAAAACCTAAGTTATCTAAAAATTCTCTACTTCCATTTCCTT 90399 Query 97511 CCCAAAT 97517 ||||||| Sbjct 90400 CCCAAAT 90406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346782782788160