Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq88 136 3e-27 >seq88 Length=166103 Score = 136 bits (150), Expect = 3e-27 Identities = 216/307 (70%), Gaps = 6/307 (2%) Strand=Plus/Minus Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATG 20280 ||||| || || | ||||||||| ||||||||||||| || || ||||| || ||| Sbjct 90340 GATTTAGGGCCAATTTATGGATTTTAATGGAGACATTTCGGCGCCGAATACAAAGATATG 90281 Query 20281 AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAA 20340 |||| ||||| ||| |||| || || || || ||||| | ||||||| | | ||| Sbjct 90280 CACACCAATTACGAAGGATAAGGTGTCGACTAAATAAAAAATTTAATTAATTAATTGAAA 90221 Query 20341 ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTA 20400 | || ||| | ||||||| |||||| || || |||||| | || | ||| | Sbjct 90220 AATAATCCAGATTCCAGAAGACATATTTTCTGTGCATGGAACCCCTCTGACATCCCTAAA 90161 Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG---AATTG 20457 |||||||| ||||| |||| ||| | || | || | | || |||| ||| |||| Sbjct 90160 ATGGCTTTACCTCCTTGTC--ATGTTTTGGC-ATAGTTCTATGTTAATGATGGAAAATTA 90104 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || |||| | || || |||| |||||||||||| || ||||| || |||||||| Sbjct 90103 TCATGTCTTTTATACTAAAGATCTTGTGATATGGGACTTGGAGTTCCCTTTAATATTGCT 90044 Query 20518 AGTTATG 20524 ||||| Sbjct 90043 TCTTATG 90037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399182598864160