Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq130 86.0 5e-12 >seq130 Length=530367 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||| | || || |||||||||||||| || ||||| || || | ||||| ||||| Sbjct 8714 ATGTAAATTTTCGTTAAAACCTTAACTGGAAAAACTATTACTTTAGATGTTGAATCTTCT 8773 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| ||| || | |||||| | |||||||| | || |||||| Sbjct 8774 GATTCTATTGAAAATGTCAAAGCTAAAATTTAAGACAAAGAAGGAATTCCCCCTGACCAA 8833 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | ||||| | || || ||| || | |||||| | ||| | |||||||| Sbjct 8834 TAAAGATTAATTTTCGCTGGAAAATAATTAGAAGATGGAAGAACTTTATCCGATTACAAT 8893 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || | ||||| |||| || |||||||| ||| |||| | ||||| Sbjct 8894 ATTTAAAAAGAATCCACTCTCCATTTAGTATTAAGATTAAGAGGAGG 8940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418302531752960