Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq232 100 3e-16 >seq232 Length=78669 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 14275 TACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT 14334 |||||||| ||| |||||||| ||||| || | |||||||| | || || | || | Sbjct 22729 TACCATCAGAAGCCGCAAAAAAAGCCAAAATATACTTAATAAAATGTTATTCCCCCTTAT 22788 Query 14335 TGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAAC 14394 | || |||| ||| || | | |||| || ||| || | |||||| || |||||||||| Sbjct 22789 TAAGCTTTTCCCAGTCTTTTTAGTCCTAAGCAAGGTCAATTTCATCTACAGTCCAAAAAC 22848 Query 14395 TAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAA 14454 | || | ||| ||||| | |||| || | || ||| ||||||||| | |||| Sbjct 22849 TGGCCATTTATTTCTTATAAGCTTCCCAAATCTAATTGTATTTTATAGGAAATAAAACAA 22908 Query 14455 ATC-TCGAAGATGTTTCTTTAAGAATT 14480 ||| | || ||| ||||||| | |||| Sbjct 22909 ATCTTTGAGGAT-TTTCTTTCAAAATT 22934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726272979200