Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq88 129 7e-25 >seq88 Length=166103 Score = 129 bits (142), Expect = 7e-25 Identities = 239/347 (69%), Gaps = 8/347 (2%) Strand=Plus/Plus Query 6911 ATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATC 6970 |||| ||||| |||||||||| | |||||| || || || | ||||||||| |||| Sbjct 90025 ATGTCAATAACCCATAAGAAGCAATATTAAAGGGAACTCCAAGTCCCATATCACAAGATC 90084 Query 6971 TTTGATAACATTGACAAGATAAAATATTGTCTATAGCATAAAATTGACACAATACATGAC 7030 ||| || | |||| ||||| | || || |||| || | ||| ||||||| Sbjct 90085 TTTAGTATAAAAGACATGATAATTTTCCATCATTAACATAGAACTATGCCAAAACATGAC 90144 Query 7031 ATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTC 7090 | ||||||||| | | | || ||||| || ||||| ||| || |||||| ||| Sbjct 90145 AAGGAGGTAAAGCCATTTTAGGGATGTCAGAGGGGTTCCATGCA--CAG-AAAATATGTC 90201 Query 7091 TATC----ATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCC 7146 | || || |||||| |||| |||| | || | ||| || || || | ||| Sbjct 90202 T-TCTGGAATCTGGATTATTTTTCAATTAATTAATTAAATTTTTTATTTAGTCGACACCT 90260 Query 7147 TGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAAC 7206 | ||||| ||||| || || || | | || | || || ||||||||||||| ||| Sbjct 90261 TATCCTTCGTAATTGGTGTGCATATCTTTGTATTCGGCGCCGAAATGTCTCCATTAAAAT 90320 Query 7207 CCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAA 7253 |||||||| || ||||||||| |||||| | | ||||| ||||| Sbjct 90321 CCATAAATTGGCCCTAAATCATTTTCTTCCCTGTCTTTAAAACCTAA 90367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595869854860800