Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq88 95.1 3e-14 >seq88 Length=166103 Score = 95.1 bits (104), Expect = 3e-14 Identities = 238/362 (66%), Gaps = 0/362 (0%) Strand=Plus/Minus Query 111426 ATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAA 111485 |||||||| ||||||||| | || ||| ||||| | ||| || |||| ||| Sbjct 90406 ATTTGGGAAGGAAATGGAAGTAGAGAATTTTTAGATAACTTAGGTTTTAAAGACAGGGAA 90347 Query 111486 GAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAA 111545 ||| |||| | || ||| |||| |||||| ||||| | || || || || || |||||| Sbjct 90346 GAAAATGATTTAGGGCCAATTTATGGATTTTAATGGAGACATTTCGGCGCCGAATACAAA 90287 Query 111546 ACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAA 111605 |||||| | || || | | || || || || | ||| | ||| || || Sbjct 90286 GATATGCACACCAATTACGAAGGATAAGGTGTCGACTAAATAAAAAATTTAATTAATTAA 90227 Query 111606 ATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665 | || || || ||| ||| | | |||| | ||||||||||||| || | Sbjct 90226 TTGAAAAATAATCCAGATTCCAGAAGACATATTTTCTGTGCATGGAACCCCTCTGACATC 90167 Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATG 111725 |||||||| | || || |||||| || || |||| ||||| | || || | Sbjct 90166 CCTAAAATGGCTTTACCTCCTTGTCATGTTTTGGCATAGTTCTATGTTAATGATGGAAAA 90107 Query 111726 CTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATT 111785 | ||||| | | || | ||||| |||||| || ||||| ||||| ||||||||| Sbjct 90106 TTATCATGTCTTTTATACTAAAGATCTTGTGATATGGGACTTGGAGTTCCCTTTAATATT 90047 Query 111786 GC 111787 || Sbjct 90046 GC 90045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348790625216