Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq167 96.9 3e-15 seq130 91.5 1e-13 >seq167 Length=324310 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| ||| | || |||||||||| |||||||||||| | Sbjct 152720 ACCTCCTCTCAATCTTAAGACTAAATGTAAGGTGGATTCTTTTTAAATGTTGTAATCAGA 152661 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | | || || || |||| | | | ||||| || || Sbjct 152660 TAAGGTTCTTCCGTCTTCTAATTATTTTCCAGCGAAAATTAATCTTTATTGGTCAGGGGG 152601 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||||| ||||| | |||| ||||| || || | | ||| || || | Sbjct 152600 GATTCCTTCTTTGTCTTGGA-TTTTAGCTTTGACGTTTTCAATAGAGTCAGAGGATTCGA 152542 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | || | ||| | ||| || ||||| || ||||| ||||| |||| |||||| Sbjct 152541 CGTCCAAAGTGATGGTTTTTCCGGTTAAGGTTTTAACGAAGATTTACATTTT 152490 >seq130 Length=530367 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 |||||||| || || ||||| | | ||| | ||||||| | | || |||||| | Sbjct 9133 TTCTTTTTAGATATTATAATCAGATAAGGTTCTTCCGTCTTCTAATTATTTTCCGGCAAA 9074 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAA 64370 ||| | | | ||||| || |||||||||||||| |||| ||||| ||||| ||| Sbjct 9073 AATTAATCTTTATTGGTCAGGGGGAATTCCTTCTTTATCTTAAATTTTG-GCTTTGACAT 9015 Query 64371 CCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 || | | |||| || || || |||| ||| | || || || ||||||||||| | Sbjct 9014 TTTCAATGGAATCAGAGGATTCAACATCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTAA 8955 Query 64431 CGAAAATTTGCATT 64444 ||||||||| |||| Sbjct 8954 CGAAAATTTACATT 8941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643001278720