Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq167 86.0 1e-11 >seq167 Length=324310 Score = 86.0 bits (94), Expect = 1e-11 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| || || |||| || || ||||||| ||||| ||||| ||||| | | Sbjct 152924 GTGTAAAGTGGATTCTTTTTAGATATTATAGTCAGATAAAGTTCTTCCGTCTTCTAATTA 152865 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||||||||| || | | | ||||| || |||||||||| || | ||| || Sbjct 152864 TTTTCCGGCGAAAATTAATCTTTATTGGTCAGGGGGAATTCCTTCTTTATCTTAAAT-TT 152806 Query 199546 TTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | || || || ||| | || ||| | | ||| |||||||| || || || || || | Sbjct 152805 TAGCTTTAACATTTTCAATGGAGTCAGAAGATTCAACATCCAAAGTAATAGTTTTTCCGG 152746 Query 199605 TGAGAGTTTTCACAAAAATTT 199625 | | |||||| || ||||||| Sbjct 152745 TTAAAGTTTTAACGAAAATTT 152725 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| | ||| | ||| | ||| || || |||| || ||| ||||||| ||||| ||||| Sbjct 153164 TCTTAAGACTAAGTGTAAAGTGGATTCTTTTTAGATGTTATAGTCAGATAAAGTTCTTCC 153105 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| | | ||||||||||| || | | | || || || ||||||||| Sbjct 153104 GTCTTCTAATTATTTTCCGGCGAAAATTAATCTTTATTGATCGGGGGGGATTCCTTCTTT 153045 Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 || | ||| ||| || || || ||| | | ||| | | ||| || ||||| |||| Sbjct 153044 GTCTTAAAT-TTTAGCTTTAACATTTTCAATAGAGTCAGAAGATTCAACGTCCAAAGTGA 152986 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTT 199625 | || || || || | |||||| |||||||||| Sbjct 152985 TGGTTTTTCCAGTTAAAGTTTTGACAAAAATTT 152953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178917249779296