Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq167 98.7 1e-15 >seq167 Length=324310 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298 |||||||| |||| ||||| ||||| | || || ||||||||||| | |||||||| Sbjct 152488 AAAAAATGTAAATCTTCGTTAAAACCTTAACCGGAAAAACCATCACTTTGGACGTCGAAT 152547 Query 38299 CCACCGAC-AGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 || | ||| || ||||| | |||| ||||||| |||||||| ||||| ||| | Sbjct 152548 CCTCTGACTCTATTGAAAACG-TCAAAGCTAAAATCCAAGACAAAGAAGGAATCCCCCCT 152606 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 |||||| | | | |||| ||| || ||| | | || |||| | ||| | || Sbjct 152607 GACCAATAAAGATTAATTTTCGCTGGAAAATAATTAGAAGACGGAAGAACCTTATCTGAT 152666 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| |||| ||| | || | ||||| || | | |||||||| || Sbjct 152667 TACAACATTTAAAAAGAATCCACCTTACATTTAGTCTTAAGATTGAGAGGAGG 152719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170999377920