Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq152 455 2e-122 seq187 437 7e-117 seq169 298 4e-75 seq268 113 3e-19 seq246 96.9 3e-14 seq208 87.8 1e-11 >seq152 Length=1988609 Score = 455 bits (504), Expect = 2e-122 Identities = 1099/1650 (67%), Gaps = 39/1650 (2%) Strand=Plus/Minus Query 517078 TTTAACACTGTGAGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTT 517137 ||| ||| ||| ||| | ||||||||| | ||||| | ||||| ||||||| | Sbjct 1763359 TTTGACATTGTAAGTGAAGTTTTCTAATCCGTTTTTGGCTTCAACT----CTTTTTT-TA 1763305 Query 517138 GTTA-----TCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCT 517192 ||| ||| | ||| | ||||| |||||| | | | ||| || || | ||| Sbjct 1763304 ATTAATTCGTCTTGTCCTTTCATTTCTTCGGCTTCTTTGACTAATCTTTCGATGTCTTCT 1763245 Query 517193 TCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTA 517252 | ||| |||||||| || || ||||| || || || || | ||| | |||||| Sbjct 1763244 TAAGACAATCTTCCTTTATCGTTGGTAATGGTGATTTTGTTTGTTTTTCCTCCGGATTTA 1763185 Query 517253 TCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGA 517312 || | ||||| || || | || || || |||| | ||| || | ||||| |||| | Sbjct 1763184 TCGGTGGCAGAAACGTTCAAAACTCCGTTTTCATCGATATCGAAAGAAACTTCGATTTAA 1763125 Query 517313 GGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTA 517372 || || ||||| | ||||| ||||| ||||||||||| ||| ||| | || | ||| Sbjct 1763124 GGAACTCCTCTGGGGGCAGGGGGGATTCCTTCCAAATTGAATTGTCCTAATTTGTGATTG 1763065 Query 517373 TCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCT 517432 |||||||| | || || ||| || ||| ||| || || |||| | | || ||||| Sbjct 1763064 TCTTTAGTCATTTATCTTTCTCCTTCGTAAACTTAAATCAAAACTCCGGGTTAGTTATCG 1763005 Query 517433 GAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATA 517492 | ||||| || || ||| ||||||||| ||||| || |||||||| ||| | | Sbjct 1763004 GCGTAAGTGGTGAAAACTTGGGATTTTTTGGCGGGAATAGTGGTGTTTCTGGGAATTAAA 1762945 Query 517493 TTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGG 517552 |||| | ||| || || || ||||| | || | || | ||| || || | || Sbjct 1762944 GTGGTGAAAATTCCTCCAGCGGTTTCGATTCCCATGGACAAGGGACAAACGTCCAATAAT 1762885 Query 517553 ACAATATTTTGAAGTTTTTCATCAGT----TTGACCAACAAGAATAGCTGCTTGAATAGC 517608 | || | || | |||| | | ||| ||| |||||| |||| || || Sbjct 1762884 AAAACGTCTTAGATGCTTTCTCCGGCGGAGTTGGTCAA----AATAGCGGCTTAAACGGC 1762829 Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668 ||| || || || || |||||||| || || | | | || ||| ||| || ||||| Sbjct 1762828 AGCTCCGTAGGCGACGGCTTCATCGGGGTTGATGGATCTGTTGGGTTCTTTTCCGTTGAA 1762769 Query 517669 AAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 |||| | | | | || | | || ||||| | | |||||||| ||||| || | Sbjct 1762768 GAAATCTTAGATTAATTATTAGATTTTGGGAATTCTGGTGGATCCTCCGACTAAAACGAC 1762709 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||| | || || ||| || || || ||| |||||||| ||||| | Sbjct 1762708 TTCTTAAACTTGGTTTTTGGACATACCGGAGTCTTTTAAGACTTTTTCGACGGGGGGGAT 1762649 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA-CAT 517847 || || | || | | |||| | |||||||||||||||||| |||||||||| ||| Sbjct 1762648 ACAGTCTTTGAAGTAAGATAAACATAATTCTTCGAATTTAGCTCTGGTAAGAGTGATCAT 1762589 Query 517848 TATAATCAATTCC--TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGA 517905 | |||| ||| |||| |||||||||||||| || || |||| ||| |||| ||| Sbjct 1762588 GA-AATC--TTCAGATTCGGCTAAAGAATCAACTTCGATGGTGGTTTAAGTAGAAGCAGA 1762532 Query 517906 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG 517965 || | |||||| | ||||||| || |||| ||||| ||| ||| | | | ||| Sbjct 1762531 TAAAATTCTTTTAGCTCTTTCACATTAAGTTCTTAATCTTCTTAAAGCTCTGG--GGTTG 1762474 Query 517966 ATTCAAATCTGTTTTATATTTTCTCTT--GAAATCTTCAACACACCATGTTACAAGACGA 518023 ||| || | | |||| | || |||||| | |||| | || | Sbjct 1762473 TTTCTGATATCGACGCTTTTTTTTTTTAAGAAATCGGCGGCACAGTAGTCGACTAATTTT 1762414 Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 | ||| |||||||| ||||| || | ||||| ||| | |||||| | |||| ||| | | Sbjct 1762413 TAATCGAAATCTTCTCCTCCTAAGTGAGTATCTCCGGCAGTAGCTTTAACTTCGAAGATT 1762354 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 || || |||| | ||| | || ||||| ||||| || || | ||| ||||| | Sbjct 1762353 CCTTCGTCAATGGTCAACAAAGAAACATCGAAAGTTCCTCCTCCTAAATCGAAAATTAAG 1762294 Query 518144 ACATTCATTTCT--TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 || || | ||| || || | ||||| || | || || |||| || || ||||| | Sbjct 1762293 ACGTTTTTCTCTCCTTTTCCT--TTTTTGTCTAATCCGTAAGCAATGGCGGCGGCAGTGG 1762236 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 |||| || |||||||||||||| || | || ||||| ||| || ||||| ||||||| Sbjct 1762235 GTTCGTTGATAATTCTCAAAACGTTTAATCCGGCAATGGCTCCGGCGTCTTTGGTGGCTT 1762176 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321 ||||||| || ||||| ||||| || || || |||| ||||| | | |||| |||| Sbjct 1762175 GTCTTTGAGAGTCGTTGAAATAAGCGGGGACGGTAACGACGGCGTGTTTAACTTATTTAG 1762116 Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381 | ||||| || ||| | |||||||| | |||| ||| || |||| || ||| | Sbjct 1762115 ATAAATAAGATTCAGCAATTTCTCTCATTTTAGTCAAAACCATGGAGGAAACTTCTTCGG 1762056 Query 518382 G--GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT---ATTACC 518436 | ||||| || |||| ||| || ||| | | ||| | ||||| | | | Sbjct 1762055 GGTGGAATTTT--TTGGTTTCTCCTTTGTATTAAATAACAATAATGGGTTTGTCGTCAGC 1761998 Query 518437 AACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAA 518496 | |||||| || ||||| ||||| || ||| || ||| || || || Sbjct 1761997 TCCGGGCTCAACTTTGAAGGGCCATTATTTAATGTCTTTTTATACAACGGATTCGTTGAA 1761938 Query 518497 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTG 518556 | ||| || || | || ||| ||||| |||||||| || | || || | ||| |||| Sbjct 1761937 TTTTCTTCCGATAAGTCTTTTGGCATCGAAAATAGTGTTTTTGGGGTTTCTGGCAACTTG 1761878 Query 518557 ATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGT 518616 || ||| || |||||||| || | ||| || || || || | ||| || || ||||| Sbjct 1761877 ATTTTTAGCAGCATCTCCGATTAATCTTTCAGTTTCGGTGAAAGCAACGTAAGAGGGAGT 1761818 Query 518617 TGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTAC 518676 || | ||||||| || || ||||| ||||||||| || | |||| ||| | ||| || Sbjct 1761817 GGTTCTGTTACCTTAGTCGTTGGCAATGATTTCAACTCTATCGTTTTACCAAATACCAAC 1761758 Query 518677 ACAACTAAAAGTTGTTCCTAAATCAATACC 518706 |||| | |||| ||||||||||| || || Sbjct 1761757 ACAAGAATAAGTGGTTCCTAAATCGATTCC 1761728 >seq187 Length=142458 Score = 437 bits (484), Expect = 7e-117 Identities = 1043/1550 (67%), Gaps = 49/1550 (3%) Strand=Plus/Plus Query 517156 TTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATT 517215 ||||| ||||||| ||| | ||| || |||| ||||| || | |||||| || || Sbjct 5034 TTCTTCAGCTTCTTTAACTAGTCTTTCGATTTCATCTTGGGAAAGTCTTCCTTTGTTGTT 5093 Query 517216 AGTAATAGTAATATTCTTGGATTTGTTTGTT-GATTTATCAGCGGCAGTCACATTAAGAA 517274 || ||| || || || |||| ||| | | |||||||||| || | || || | | Sbjct 5094 AGAAATTGTTATTTT-TTGGGTTTTTCCGCCAGATTTATCAGTTGCTGAAACGTTCATGA 5152 Query 517275 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 517334 ||||| | ||||| ||||| || |||||||||| || || ||||| | ||||||| Sbjct 5153 CTCCATTTTCGTCCAAGTCAAAAGTAACTTCAATTTAGGGAACTCCTCTAGGGGCAGGTG 5212 Query 517335 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTA-TTATCTTTAGTGAATTTTCGTTCA 517393 | || ||||| || | ||| ||| | || | | |||||||||||||||| | |||| Sbjct 5213 GAATTCCTTCTAAGCTGAATTGTCCTA-ATAAGTGGTTATCTTTAGTGAATTACCTTTCA 5271 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || || || | || ||| ||| | | | |||||| | |||||| || || | | | Sbjct 5272 CCTTCAAAGACTTAGATGTGTACTCCTGGCTAATTATCAGCATAAGTGGTGAAAATTTAG 5331 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 |||||||| ||||||||| || |||||| ||| | |||| | || || || || Sbjct 5332 GATTTTTTGGCAGGAATTGTGGTATTTCTAGGAATTAAGGTGGTGAAAACTCCTCCAGCA 5391 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 ||||| | || | ||| | ||| ||||| | || |||| || || ||||| ||| Sbjct 5392 GTTTCGATTCCCAAAGACAAGGGACAAACATCTAATAAAACAACATCTTACAGTTTATCA 5451 Query 517574 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 517633 | || | | ||||||||||| || || || ||||| ||||| ||||||||| Sbjct 5452 CCTTATTAGTTAGTTAAAATAGCTGCTTAAACTGCGGCTCCATAGGCAACGGCTTCATCA 5511 Query 517634 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 517693 || |||| | ||| ||| |||| ||| || || ||| | | | || | || | || Sbjct 5512 GGGTTAATATTTTTATTAAGTTCTTTGCCGTTAAAATAGTCTTTTAGCAATTCTTAAACT 5571 Query 517694 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 517753 || || || | | |||||||| ||||| || | || | || | |||||| | | Sbjct 5572 TTGGGGATTCTTGTGGATCCTCCTACTAAAACTACGTCGTTAACTTAAGATTTAGAAACT 5631 Query 517754 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAA 517813 ||| || | ||| ||| ||||| || || | | |||| | | | ||| Sbjct 5632 CCTGAGTCTTTAAGAACAGATTCTACGGGGGGAATACACTATTTAAAGTAATTTAGACAC 5691 Query 517814 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGA-CATTATAATCAATTCC--TTCGAACAAA 517870 | |||||||||||||||||| || | ||| ||| | |||| ||| ||| || Sbjct 5692 AATTCTTCGAATTTAGCTCTGGTGATTGTGGTCATGA-AATC--TTCAGATTCAGCTAAG 5748 Query 517871 GAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACAT 517930 ||||| ||||| || || |||| ||| |||| ||||| | ||| || | ||||||| Sbjct 5749 GAATCCACTTCGATTGTGGTTTAAGTAGAAGCAGATAAAATTCTTTTGGCTCTTTCACAT 5808 Query 517931 GCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTGATTCAAATCT-GTTTTATATTTTC 517988 || |||| ||||| |||| ||| ||| |||| ||| || | | | | | | || Sbjct 5809 TAAGTTCTTAATCTTC-TAAGTGCTCTTG--GATTATTTCTGATGTCGATGTGTTTCTTT 5865 Query 517989 TCTTGAAATCTTCAACA-CACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCA 518045 | ||| ||| ||| | ||| || || || | |||||| |||||||| ||||| | Sbjct 5866 TTTTGGAAT--TCAGCTGCACAATATTCGACTAATTTATTATCGAAATCTTCTCCTCCTA 5923 Query 518046 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 518105 | | |||| ||| | |||||| | |||| ||||| ||| || || | ||| | | || Sbjct 5924 AATGGGTATCTCCAGCAGTAGCTTTAACTTCGAAAACTCCGTCATCTAAAGAAAGTAAAG 5983 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT---TTGTCTT 518162 ||||| ||||| || || | ||| ||||| ||||||| ||||| ||| ||| Sbjct 5984 AAACATCGAAAGTTCCTCCTCCTAAATCGAAAATTAGTACATATTTTTCTCCTTTGCCTT 6043 Query 518163 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 518222 ||||||| || ||||| |||| ||||| ||||| || ||||||||||||||||||| Sbjct 6044 ---TTTTATCCAGTCCATAGGCAATGGCAGCTGCAGTGGGCTCATTAATAATTCTCAAAA 6100 Query 518223 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 518282 |||| | || |||||| ||||||||||||||||| |||||| || |||||||||| Sbjct 6101 CATTTAATCCGGCAATTGAGCCTGCATCTTTAGTGGCAAGTCTTTAAGAGTCGTTAAAAT 6160 Query 518283 ATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA-CCAATATAAGCGCTT---GCC 518338 | ||||| ||||||| ||| || | | ||| |||| || | |||| ||| || Sbjct 6161 AAGCAGGCACAGTAACAACAGC-TTATTTAACAGTTTAGCCCAAATAA---CTTTCAGCA 6216 Query 518339 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC--TGGGGAATATTGCTTGG 518396 || ||||||||| | | | ||| || ||||||| ||| | ||||| || || Sbjct 6217 ACTTCTTTCATTTTCGTAAGCACCATAGAAGAAATTTCTTCGGCGTGGAATTTT--TTTA 6274 Query 518397 ATTCATTTTGATATGATACTTCAAAATATGGTTTATTA-------CCAACATTAATAACT 518449 ||| || | || ||| |||| | || || ||| ||| | | || Sbjct 6275 TTTCGCCTTTAAATTTTAC-ACAAATAAGGGGTTTTTAATCCGCGCCAGCTT---CGACC 6330 Query 518450 TTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATT 518509 ||||| ||||| | |||||| ||| ||| ||| || |||| || | || || || Sbjct 6331 TTAAAAGGCCAATTTTTCATGTCTTTTTGGACAGTTGGGTCTCCGAATTTTCGCCCGATA 6390 Query 518510 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCA 518569 | || ||| || || |||| || || || || | || |||| | | | ||||| Sbjct 6391 AGTCTTTTGGCGTCGAAAACTGTGTTTTAAGGGTTTCTAGCGACTTGGTTTCTAGCTGCG 6450 Query 518570 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 518629 ||||| || || ||| | || | || | || || || ||||| || | || ||| Sbjct 6451 TCTCCGATTAGTCTTTCGGATTCGCTGAAGGCGACGTAGGAAGGAGTGGTTCTGTTTCCT 6510 Query 518630 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 || || || || || ||||| ||| | | |||||||| || || || || Sbjct 6511 TGGTCGTTGGCGATTATTTCTACTCTGTCGTTTTGCCAGACTCCGACGCA 6560 >seq169 Length=395432 Score = 298 bits (330), Expect = 4e-75 Identities = 897/1365 (66%), Gaps = 41/1365 (3%) Strand=Plus/Plus Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 |||||||| || | || || ||| || ||| ||| ||| || ||| ||||||| Sbjct 288557 TTATCTTTGGTCATTTATCTTTCTCCTTCGTAAACAGAGATGGTGACTTCAGTTTGTCCG 288616 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489 || ||||| || || | | |||||||||| || || || || ||||| || Sbjct 288617 TCGACTTAAGTGGTGAAAATTTTGGATTTTTTGGTGGGGATAGTGGTATTTCTGGGGATC 288676 Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549 | | ||| |||||| || ||| ||||| | || | ||| | |||| |||||||| Sbjct 288677 AAAGTGGCCATAATTCCTCCTTTAGTTTCAATTCCCAAAGACAAGGGAGCGACATCAATC 288736 Query 517550 AGGACAATATTTTGAAGTTTT--TCATCAGTTTGACCA--ACAAGAATAGCTGCTTGAAT 517605 | |||| | | | | ||| || | || || | |||| |||||| |||| || Sbjct 288737 A--ACAAAACGTCGTTGATTTGGTCGTG-GTCAGATCCGGACAA-AATAGCGGCTTAAAC 288792 Query 517606 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 517665 || || || || || || |||||||| || |||| | || || |||| ||| || | Sbjct 288793 GGCGGCTCCGTAGGCGACGGCTTCATCGGGGTTAATGGATTTGTTAAGTTCTTTTCCTTC 288852 Query 517666 GAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATA 517724 |||||| | ||| || ||||||| || || ||||| | | |||||||||||||| | Sbjct 288853 GAAAAATTCTTGTAA-AAGTTGTTAAACTTTGGGAATTCTGGTGGATCCTCCAACTAAAA 288911 Query 517725 CAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTT 517784 | ||||| | | | | |||| || | || || ||||||||||||||||| | Sbjct 288912 CGATTTCGTCGATTTCTTTTTTAGACATTCCAGAGTCTTTCAAAACTTTTTCAACGGGGT 288971 Query 517785 CAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 517844 | | | | || | | |||| | |||||||||||| ||||| || | |||| Sbjct 288972 CGATGGTGAATTTGAATTGTTATAAACATAATTCTTCGAATTTGGCTCTGGTGATGGTGA 289031 Query 517845 CATTATAATCAATTCC--TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 517902 || | || ||| |||| |||||| |||||||| || || |||| ||| | || Sbjct 289032 TGTTGAAGTC--TTCAGATTCGGCCAAAGAGTCAACTTCGATGGTGGTTTAAGTGGCAGC 289089 Query 517903 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT-----T 517957 ||||| | |||||| | ||||||| || || | ||||| ||| ||||| | Sbjct 289090 AGATAAAATTCTTTTAGCTCTTTCACATTAAGTTCTCAATCTTCTTAAAGCTTTGGGGTT 289149 Query 517958 GCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA 518017 | || |||||| || |||| |||||| | ||| || | ||| || || Sbjct 289150 GTTG-TTGATT----TCGACTTTAGTTTTTCTGTAGAATTCGGAAGTACAATATTCGACC 289204 Query 518018 AGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGG 518077 | | | || |||||||| ||||| || | || | ||| | || ||||| |||| | Sbjct 289205 AAATTGGTGTCGAAATCTTCTCCTCCTAAGTGGGTGTCTCCAGCAGTGGCTCTGACTTCG 289264 Query 518078 AAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAA 518137 |||| ||| || |||| || ||| | || ||||| ||||| || || | ||| || Sbjct 289265 AAAATTCCTTCGTCAATAGTCAACAAAGAAACATCGAAAGTTCCTCCTCCTAAATCGAAG 289324 Query 518138 ATAAGTACATTCATTTCT--TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAG 518195 || | || || | || || || ||||| || | || || |||| || |||| Sbjct 289325 ATCATGACGTTTTTAACTCCTTAAGTT--TTTTTGTCTAATCCGTAGGCAATGGCGGCAG 289382 Query 518196 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 518255 | || ||||| || || |||||||||| ||| | || | ||| || || ||||||| Sbjct 289383 CGGTGGGTTCGTTGATGATTCTCAAAATATTTAATCCGGAAATGGCACCGGCGTCTTTAG 289442 Query 518256 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT 518315 |||| |||||| || ||||| ||||| || ||||| || |||||||| ||||| || | Sbjct 289443 TGGCCAATCTTTGAGAGTCGTTGAAATAAGCGGGAACGGTGATAACGGCGTCAGTGACGT 289502 Query 518316 CTTT--ACCAATA-TAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAA 518372 ||| || | || | || || | |||||||| | | |||| ||| | |||| Sbjct 289503 TTTTGGACAAGTAGTTTTCG---GCAACTCTTTTCATTTCAGTCAAAACCATGGCGGAAA 289559 Query 518373 TTTGTTCTGG--GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 518430 ||| ||| || ||||| || ||| |||| |||| | | || | | | ||||| Sbjct 289560 TTTCTTCGGGGTGGAATTTT--TTGAATTCGTTTTTGTGTCTGACAACGATAATGGGTTT 289617 Query 518431 ---ATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG 518487 || | || |||||| || ||||||| || || |||| || | Sbjct 289618 TTCGTTTTCGTCAGCTTCAACTTTGAAGGGCCAGTTTTCCAAATCTTTTTAGATGGCGGA 289677 Query 518488 GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAAT 518547 ||| || | | ||| || || |||| ||| ||||| |||| || || || || | Sbjct 289678 GTCTTTGATTTTTCTTCCGATCAATCTTTTAGCATCGAAAACGGTGTTCAAAGGGTTTTT 289737 Query 518548 TGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA 518607 || |||||| ||| || | |||||| || | |||| || || || | ||| || Sbjct 289738 GGCGACTTGATTTTTAGCAGAATCTCCGATTAATCTTTCTTATTCGGTGAAGGCAACGTA 289797 Query 518608 TGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCA 518667 || || || || | ||||||| |||||| | || ||||||||| || | |||| ||| Sbjct 289798 AGAGGGGGTGGTTCTGTTACCTTAATCATTGGGGATGATTTCAACTCTATCGTTTTACCA 289857 Query 518668 TACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 || || || || |||| ||||| | ||| || |||||||| Sbjct 289858 GACTCCGACGCAGGAGTAAGTGGTTCCAAGATCGATTCCAATAGC 289902 >seq268 Length=108487 Score = 113 bits (124), Expect = 3e-19 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || |||| || ||||| || ||||| || || ||||| || || ||||| || | Sbjct 91370 CCGTAAGCAAGGGCGGCAGCGGTGGGTTCGTTGATGATTCTTAAGACGTTAAGTCCGGAG 91311 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| |||| || |||||||||||||||||||| || ||||| ||||| || || || ||| Sbjct 91310 ATTTTTCCGGCGTCTTTAGTGGCTTGTCTTTGGGAGTCGTTGAAATAGGCGGGGACGGTA 91251 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTA 518353 | ||||| | | || ||| || | |||||| || |||| |||||||||| Sbjct 91250 ACGACGGCGTTGTTGACGGTTTTTCCTAAATAAGCTTCGGCAGTTTCTTTCATTTTA 91194 >seq246 Length=1211319 Score = 96.9 bits (106), Expect = 3e-14 Identities = 97/125 (78%), Gaps = 12/125 (10%) Strand=Plus/Minus Query 143777 ATTGATTCAGCTAATATAGTTTCCAAATATT----GTTTTCTTTCAGGTAAA--CCAGTT 143830 |||| |||| ||||||| |||||||||| |||||||| ||| |||| | Sbjct 636767 ATTGTTTCATTTAATATACAATCCAAATATTCCCTGTTTTCTT------AAATTCCAGAT 636714 Query 143831 TGTAACATTTTCAACATATAATAGAGTTTATCAAATCTAGTTCTAAAAAATGTTGCAGAC 143890 |||||| || ||||||||| | | || |||||||||||||||||||||||| |||||| Sbjct 636713 CTTAACATCTTTAACATATAAAATAATTAATCAAATCTAGTTCTAAAAAATGTAGCAGAC 636654 Query 143891 ATCAT 143895 ||||| Sbjct 636653 ATCAT 636649 Score = 86.0 bits (94), Expect = 5e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 702234 ATGACTACAACTGGACATGGTAGTGTCCGATTTAATCCTAATTTATATGCTGATGGAAAA 702293 || |||||||||||| || |||||| ||||||| ||||||||||||| ||||||| Sbjct 823985 ATAACTACAACTGGAGGAGGAAGTGTCAGATTTAACCCTAATTTATATGAAAATGGAAAG 823926 Query 702294 GTTTGCCTATCTATTTTGGGAACTTGG 702320 |||||||| ||| | || || |||||| Sbjct 823925 GTTTGCCTTTCTTTGTTAGGCACTTGG 823899 >seq208 Length=351902 Score = 87.8 bits (96), Expect = 1e-11 Identities = 118/162 (73%), Gaps = 7/162 (4%) Strand=Plus/Minus Query 681619 ATGACACATTTTTTATTTTATGGGCCTCCAGGAACAGGAAAAACTTCTGCTATTTTAGCG 681678 ||| | ||||| ||||| |||| ||||||||||| || |||||||| ||||||||| Sbjct 181846 ATGCCTCATTTATTATTACATGGACCTCCAGGAACTGGTAAAACTTCGAGTATTTTAGCT 181787 Query 681679 ATGGGTAGAGAAATTTTCAAGGAAC--ATTTTCA---AAATAGAGTTATTGAATTCAATG 681733 | | | | || | | | || | ||||| | ||| ||| | |||| || |||| Sbjct 181786 TTAGCAAAATAATTAT--ATGGGCCTGATTTTTACAGAAAAAGAATACTTGAGTTAAATG 181729 Query 681734 CTTCTGATGACAGAGGAATTAATGCTGTTCGAGAAAAAATTA 681775 |||| ||||| ||||||||| | | ||| |||||||||||| Sbjct 181728 CTTCAGATGATAGAGGAATTTAAGTAGTTAGAGAAAAAATTA 181687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780808108491328