Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq152 343 2e-89 seq187 302 6e-77 seq77 158 2e-33 seq169 141 1e-28 seq85 93.3 5e-14 seq268 82.4 1e-10 >seq152 Length=1988609 Score = 343 bits (380), Expect = 2e-89 Identities = 1027/1570 (65%), Gaps = 31/1570 (2%) Strand=Plus/Minus Query 6589 TTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGT 6648 ||| || |||| ||| | |||| |||||||||| || ||||| || ||||| || || Sbjct 1763278 TTCGGCTTCTTTGACTAATCTTTCGATGTCTTCTTAAGACAATCTTCCTTTATCGTTGGT 1763219 Query 6649 AATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACC 6708 ||| || || || | | ||| || || ||||| ||| || ||||||| || Sbjct 1763218 AATGGTGATTTTGTTTGTTTTTCCTCCGGATTTATCGGTGGCAGAAACGTTCAAAACTCC 1763159 Query 6709 ATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAAT 6768 ||| |||| | |||||| || | |||| || || || || || | || || Sbjct 1763158 GTTTTCATCGATATCGAAAGAAACTTCGATTTAAGGAACTCCTCTGGGGGCAGGGGGGAT 1763099 Query 6769 ACCCGTTAAATCAAAT-GTACCAAGTAAACTG-TTATCCGTCGCCTTCTTACGTTCACCT 6826 || |||| ||| || | || | || || || | | | | | | ||| ||| Sbjct 1763098 TCCTTCCAAATTGAATTGTCCTAATTTG--TGATTGTCTTTAGTCATTTATCTTTCTCCT 1763041 Query 6827 TCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCT 6886 || || |||| ||| || | |||| ||||| || | ||| | ||| | Sbjct 1763040 TCGTAAACTTAAATCAAAACTCCGGGTTAGTTATCGGCGTAAGTGGTGAAAACTTGGGAT 1762981 Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 || || | ||||| || || ||||| ||||| | | ||| | ||| || || ||| Sbjct 1762980 TTTTTGGCGGGAATAGTGGTGTTTCTGGGAATTAAAGTGGTGAAAATTCCTCCAGCGGTT 1762921 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 |||| ||| | |||| || |||||||| | ||| | ||||| |||| | ||| Sbjct 1762920 TCGATTCCCATGGACAAGGGACAAACGTCCAATAATAAAACGTCTT----AGATGCTTTC 1762865 Query 7007 CCTTCACCCGTT----AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATC 7062 | ||| || || ||||||| || | || ||||| ||||| || ||||| Sbjct 1762864 TCCGGCGGAGTTGGTCAAAATAGCGGCTTAAACGGCAGCTCCGTAGGCGACGGCTTCATC 1762805 Query 7063 GGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAAT 7122 |||||| || | | | || ||||||| ||||| || |||| | | | || || || Sbjct 1762804 GGGGTTGATGGATCTGTTGGGTTCTTTTCCGTTGAAGAAATCTTAGATTAATTATTAGAT 1762745 Query 7123 TTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGAT 7182 ||| || |||| || ||||| ||||| ||||||| ||| | |||| | ||| | || Sbjct 1762744 TTTGGGAATTCTGGTGGATCCTCCGACTAAAACGACTTCTTAAACTT--GGTTTTTGGAC 1762687 Query 7183 CTTT--GAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATA 7240 | |||||| | ||||||||| || ||||| | ||| | | | Sbjct 1762686 ATACCGGAGTCTTTTAAGACTTTTTCGACGGGGGGGATACAGTCTTTGAAGTAAGATAAA 1762627 Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300 || | ||| || || || | ||||| | | |||||| | ||| ||| Sbjct 1762626 CATAATTCTTCGAATTTAGCTCTGGTAAGAGTGATCATGAAATCTTCAGATTCGGCTAAA 1762567 Query 7301 GAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 ||||||| ||| ||||| |||| | | | |||||| ||| || || | ||||| Sbjct 1762566 GAATCAACTTCGATGGTGGTTTAAGTAGAAGCAGATAAAATTCTTTTAGCTCTTTCACAT 1762507 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTT-CTTATGTTTACG 7419 |||| ||| | | | || | ||||| ||||| ||| | ||| Sbjct 1762506 TAAGTTCTTAATCTTCTTAAAGCTCTGGGGTTGTTTCTGATATCGACGCTTTTTTTT--- 1762450 Query 7420 TTTAA--ACTCTTCAGAGAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAA 7476 ||||| | || | | ||| ||||| | | | ||||||||||||| || || || Sbjct 1762449 TTTAAGAAATCGGCGGCACAGTAGTCGACTAATTTTT-AATCGAAATCTTCTCCTCCTAA 1762391 Query 7477 GTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGA 7536 ||| ||||| || || || ||||| ||||| ||||| ||| | |||||| | ||||| || Sbjct 1762390 GTGAGTATCTCCGGCAGTAGCTTTAACTTCGAAGATTCCTTCGTCAATGGTCAACAAAGA 1762331 Query 7537 AACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTT 7596 |||||| || || || || || | || ||||| | ||||| | || | | | || Sbjct 1762330 AACATCGAAAGTTCCTCCTCCTAAATCGAAAATTAAGACGTTTTTCTCTCCTTTTCCTTT 1762271 Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 || || | ||||| || || || || || || ||||| || ||||| | | | ||| Sbjct 1762270 TTTGTCTAATCCGTAAGCAATGGCGGCGGCAGTGGGTTCGTTGATAATTCTCAAAACGTT 1762211 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 | || ||||| | | | || ||||| || ||||||| ||| || ||||| || || || Sbjct 1762210 TAATCCGGCAATGGCTCCGGCGTCTTTGGTGGCTTGTCTTTGAGAGTCGTTGAAATAAGC 1762151 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 ||||| || ||||| |||| | |||| ||| | ||| ||||| || || ||| | Sbjct 1762150 GGGGACGGTAACGACGGCGTGTTTAACTTATTTAGATAAATAAGATTCAGCAATTTCTCT 1762091 Query 7777 CATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTT 7836 |||||| || | |||||| || |||| ||||| | || | ||| ||||| || || Sbjct 1762090 CATTTTAGTCAAAACCATGGAGGAAACTTCTTCGGGGTGGAATTTTTTGGTTTCTCCTTT 1762031 Query 7837 AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATC 7896 | | || |||| |||||||| || |||| ||||| ||| || | | ||| | Sbjct 1762030 GTATTAAATAACAATAATGGGTTTGTCGTCAGCTCCGGGCTCAACTTTGAAGGGCCATTA 1761971 Query 7897 TTTCATATCGTCTTGGAC--CTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCA 7954 ||| || || | || || | | | || || |||||||||||||| | || ||| Sbjct 1761970 TTTAATGTCTTTTTATACAACGGAT--TCGTTGAATTTTCTTCCGATAAGTCTTTTGGCA 1761913 Query 7955 TCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGA 8014 || |||| |||||||||||||| |||| ||| || || || || || ||||| | Sbjct 1761912 TCGAAAATAGTGTTTTTGGGGTTTCTGGCAACTTGATTTTTAGCAGCATCTCCGATTAAT 1761853 Query 8015 CGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTC 8074 | ||| | |||| || || || ||||| || || || |||| || |||| |||||| Sbjct 1761852 CTTTC---AGTTTCGGTGAAAGCAACGTAAGAGGGAGTGGTTCTGTTACCTTAGTCGTTG 1761796 Query 8075 GCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAA 8134 ||||| ||||| || | ||||||| ||| | || || || ||||| || ||||||||| Sbjct 1761795 GCAATGATTTCAACTCTATCGTTTTACCAAATACCAACACAAGAATAAGTGGTTCCTAAA 1761736 Query 8135 TCAATACCGA 8144 || || |||| Sbjct 1761735 TCGATTCCGA 1761726 >seq187 Length=142458 Score = 302 bits (334), Expect = 6e-77 Identities = 893/1355 (66%), Gaps = 49/1355 (4%) Strand=Plus/Plus Query 6820 TTCACCTTCATAGACTTTAAT-TGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGA 6878 |||||||||| |||||| || ||| || | || | |||||| || | ||| | Sbjct 5268 TTCACCTTCAAAGACTTAGATGTGT-ACTCCTGGCTAATTATCAGCATAAGTGGTGAAAA 5326 Query 6879 TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCAC 6938 ||| ||| || | ||||| || |||||||| ||||| | | ||| | || || | Sbjct 5327 TTTAGGATTTTTTGGCAGGAATTGTGGTATTTCTAGGAATTAAGGTGGTGAAAACTCCTC 5386 Query 6939 CCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAG 6998 | |||||||| ||| | ||||| || || || || | | | |||| |||| Sbjct 5387 CAGCAGTTTCGATTCCCAAAGACAAGGGACAAACATCTAATAAAACAACATCTT--ACAG 5444 Query 6999 ATTCGTTCCCT--TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGC 7056 || || | | ||||| || || |||| || | || || || || || || Sbjct 5445 TTTATCACCTTATTAGTTAGTTAAAATAGCTGCTTAAACTGCGGCTCCATAGGCAACGGC 5504 Query 7057 CTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTG 7116 ||||| |||||||| ||||||| |||||||| ||||||||||| || || || || Sbjct 5505 TTCATCAGGGTTAATATTTTTATTAAGTTCTTTGCCGTTAAAATAGTCTTTTAGCAATTC 5564 Query 7117 TTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTT 7176 || || ||| ||||||| ||| ||||| || || ||||| | || || |||| ||||| Sbjct 5565 TTAAACTTTGGGGATTCTTGTGGATCCTCCTACTAAAACTACGTCGTTAACTTAAGATTT 5624 Query 7177 ATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA---TTTACGGAACAA 7233 | | ||||||| ||| ||| || || ||||| |||| || | Sbjct 5625 AGAAACTCCTGAGTCTTTAAGAACAGATTCTACGGGGGGAATACACTATTTA---AAGTA 5681 Query 7234 GTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTC 7293 | | ||||| ||| || || || | ||| || | || |||||| | || Sbjct 5682 ATTTAGACACAATTCTTCGAATTTAGCTCTGGTGATTGTGGTCATGAAATCTTCAGATTC 5741 Query 7294 GTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCG 7353 ||| ||||| | ||| || || |||| | | | |||||| ||| || || | Sbjct 5742 AGCTAAGGAATCCACTTCGATTGTGGTTTAAGTAGAAGCAGATAAAATTCTTTTGGCTCT 5801 Query 7354 CTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC--CGGAA----ATATCTTT 7407 ||||| |||| ||| | | ||| || | || ||| | || || | ||| Sbjct 5802 TTCACATTAAGTTCTTAATCTTCTAAGTGCTCTTGGATTATTTCTGATGTCGATGTGTTT 5861 Query 7408 CTTATGTTTACGTTTAAACTCTTCAG-AGAAGTGTCGAAGGAGTCTCGAATCGAAATCTT 7466 ||| ||| || || || | | | || |||| | | | ||||||||||| Sbjct 5862 CTT---TTT---TTGGAATTCAGCTGCACAATATTCGACTAATT-TATTATCGAAATCTT 5914 Query 7467 CACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGT 7526 | || || || || ||||| || || || ||||| ||||| || | || | || | Sbjct 5915 CTCCTCCTAAATGGGTATCTCCAGCAGTAGCTTTAACTTCGAAAACTCCGTCATCTAAAG 5974 Query 7527 TTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT 7586 | || |||||||| || || || || || | || ||||| ||||| | | || | Sbjct 5975 AAAGTAAAGAAACATCGAAAGTTCCTCCTCCTAAATCGAAAATTAGTACATATTTTTC-T 6033 Query 7587 CGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | ||||| || ||||| || || || || || || || || || || |||||||||| Sbjct 6034 C--CTTTGCCTTTTTTATCCAGTCCATAGGCAATGGCAGCTGCAGTGGGCTCATTAATAA 6091 Query 7644 TAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 | | || ||| || | || ||||| | | |||||||| || || ||| || || Sbjct 6092 TTCTCAAAACA-TTTAATCCGGCAATTGAGCCTGCATCTTTAGTGGCAAGTCTTTAAGAG 6150 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 |||||||| || || || || || || || || | | || | | || | ||| | Sbjct 6151 TCGTTAAAATAAGCAGGCACAGTAACAACAGCTTATTTAACAGTTTAGCCCAAATAACTT 6210 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 || || | ||||||||||| ||||| ||||| || ||||| ||||| || || | | Sbjct 6211 TCAGCAACTTCTTTCATTTTCGTAAGCACCATAGAAGAAATTTCTTCGGCGTGGAATTTT 6270 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT---ATCCGCAGCACCGGGGATA 7879 || |||| || ||||| | || ||| | |||||| |||||| || | | Sbjct 6271 TTTATTTCGCCTTTAAATTTTACACAAATAAGGGGTTTTTAATCCGCGCCAGCTTCG--- 6327 Query 7880 ACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG---TCCGAAAACTTTCTT 7936 |||||| | | ||||| |||||| || | ||||| | ||||| |||| || |||| Sbjct 6328 ACCTTAAAAGGCCAATTTTTCATGTCTTTTTGGA-CAGTTGGGTCTCCG--AATTTTCGC 6384 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 |||||||| | || || || ||||||||||||| ||||| | || |||||| | Sbjct 6385 CCGATAAGTCTTTTGGCGTCGAAAACTGTGTTTTAAGGGTTTCTAGCGACTTGGTTTCTA 6444 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || ||||| ||||| || | ||| ||| | || |||||||| || || || ||| Sbjct 6445 GCTGCGTCTCCGATTAGTCTTTC---GGATTCGCTGAAGGCGACGTAGGAAGGAGTGGTT 6501 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 | || ||||||||||| || || |||||||| | ||||||||||||||| |||||||| Sbjct 6502 CTGTTTCCTTGGTCGTTGGCGATTATTTCTACTCTGTCGTTTTGCCAGACTCCGACGCAG 6561 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGCTTG 8151 || || || ||||| | || || |||||||| || Sbjct 6562 GAGTAGGTGGTTCCGAGGTCGATTCCGATTGCGTG 6596 >seq77 Length=340953 Score = 158 bits (174), Expect = 2e-33 Identities = 249/354 (70%), Gaps = 2/354 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||| || |||||||| || || || | || | ||||| || | ||| Sbjct 220032 TCGAAATCTTCTCCTCCCAAGTGGGTGTCTCCAGAAGTGGACAAAACTTCGAAAACTCCT 219973 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| |||| | ||||||||||| || || || |||| || || | | | Sbjct 219972 CCATCAATAGTTAAAATTGAAACATCAAAAGTTCCTCCTCCCAAATCGAAGACCAAAATA 219913 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || |||||||| || || || | ||||| || || || || |||| || || Sbjct 219912 TTGACTTCTTCGTCTTTTTTTTTGTCTAAGCCGTAGGCAATGGCGGCGGCCGGGGGCTCG 219853 Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | ||| | || || ||| || || | ||| || | || ||||| || || |||| Sbjct 219852 TTGAGAATTCTGACTAC-GTTGAGTCCGGAAATGGTGCCGGCGTCTTTGGTGGCCTGTCT 219794 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| | ||||| |||||||| ||||| |||||||| |||| |||||| || || | Sbjct 219793 TTGGGCGTCGTTGAAGTAGGCGGGGACAGTTACGACTGCGTTTTCGACTTTTTTTCCCAA 219734 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | ||| ||||| || ||||||||||| | |||||| | ||||| ||||| Sbjct 219733 GTAAGTTTCGGCGATTTCCTTCATTTTGGTCAAAACCATGGCGGAAATTTCTTC 219680 Score = 82.4 bits (90), Expect = 1e-10 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 7029 CTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTT 7088 ||||||| | || ||| | || || || |||||||||||||| || ||| |||||| Sbjct 220460 CTTGGACGGCGGCGCCGAAGGCAACTGCTTCATCGGGGTTAATTCCTTGATTAGGTTCTT 220401 Query 7089 TACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGA 7148 | ||||| || |||| | | || | |||||| ||||||| || ||||| |||| Sbjct 220400 TTCCGTTGAAGAAATCTTTGACTAATTATCTAATTTTGGGGATTCTGGTGGATCCTCCGA 220341 Query 7149 CCAAAACGATTTCATTCACTTTCGATTT 7176 | ||||| ||||| || | || ||||| Sbjct 220340 CTAAAACTATTTCGTTAATTTCGGATTT 220313 >seq169 Length=395432 Score = 141 bits (156), Expect = 1e-28 Identities = 876/1393 (63%), Gaps = 21/1393 (2%) Strand=Plus/Plus Query 6765 GAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCAC 6824 |||| || |||||||| ||| || | ||| |||||||| | | | | | | ||| | Sbjct 288522 GAATTCCAGTTAAATCGAATTCTCCTAATAATCTGTTATCTTTGGTCATTTATCTTTCTC 288581 Query 6825 CTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTT 6884 |||| || || || || || ||| ||| || | || | ||| |||| Sbjct 288582 CTTCGTAAACAGAGATGGTGACTTCAGTTTGTCCGTCGACTTAAGTGGTGAAAATTTTGG 288641 Query 6885 CTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAG 6944 ||| || | || || || |||||||| || || | | || |||||| || || ||| Sbjct 288642 ATTTTTTGGTGGGGATAGTGGTATTTCTGGGGATCAAAGTGGCCATAATTCCTCCTTTAG 288701 Query 6945 TTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC-TTGAACAGATTCG 7003 |||| | ||| | ||||| || | || || | | || | ||| |||| | | || Sbjct 288702 TTTCAATTCCCAAAGACAAGGGAGCGACATCAATCAACAAAACGTCGTTGATTTGGT-CG 288760 Query 7004 TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 | | || | || || ||||||| || | || ||||| ||||| || |||||| Sbjct 288761 TGGTCAGATCCGGACAAAATAGCGGCTTAAACGGCGGCTCCGTAGGCGACGGCTTCATCG 288820 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 |||||||| | ||| || |||||||| || | ||| | || ||| | ||||| || | Sbjct 288821 GGGTTAATGGATTTGTTAAGTTCTTTTCCTTCGAAAAATTCTTGTAAAAGTTGTTAAACT 288880 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 || || |||| || ||||| || || ||||||||||| | | |||| ||| | || Sbjct 288881 TTGGGAATTCTGGTGGATCCTCCAACTAAAACGATTTCGTCGA-TTTCTTTTT-TAGACA 288938 Query 7184 TTT--GAGTCTCGAAGTGTTTTTTCGACAGGTTCCATAC---ATTTACGGAACAAGTCCA 7238 || |||||| | |||||| || || || || |||| ||| | | Sbjct 288939 TTCCAGAGTCTTTCAAAACTTTTTCAACGGGGTCGATGGTGAATTT---GAATTGTTATA 288995 Query 7239 TACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATA 7298 ||| | ||| || || || | ||| |||| | | ||| || | ||| | Sbjct 288996 AACATAATTCTTCGAATTTGGCTCTGGTGATGGTGATGTTGAAGTCTTCAGATTCGGCCA 289055 Query 7299 ACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 | || |||| ||| ||||| |||| | | | |||||| ||| || || | |||| Sbjct 289056 AAGAGTCAACTTCGATGGTGGTTTAAGTGGCAGCAGATAAAATTCTTTTAGCTCTTTCAC 289115 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | |||| || | | | || ||||| | || || ||| ||| | Sbjct 289116 ATTAAGTTCTCAATCTTCTTAAAGCTTTGGGGTTGTTGTTGATTTCGACTTTAGTTTTTC 289175 Query 7419 GTTTAAACTCTTCAG-AGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477 | || || || | || |||| | | | | ||||||||||| || || ||| Sbjct 289176 TGTAGAATTCGGAAGTACAATATTCGACCAAAT-TGGTGTCGAAATCTTCTCCTCCTAAG 289234 Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537 || || || || || || ||| ||||||| || || ||| | ||||| | ||||| ||| Sbjct 289235 TGGGTGTCTCCAGCAGTGGCTCTGACTTCGAAAATTCCTTCGTCAATAGTCAACAAAGAA 289294 Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTC 7597 ||||| || || || || || | || || || | ||||| || | | | | || Sbjct 289295 ACATCGAAAGTTCCTCCTCCTAAATCGAAGATCATGACGTTTTTAACTCCTTAAGTTTTT 289354 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 || || | ||||| || || || || || || ||||| || || || | | | || Sbjct 289355 TTGTCTAATCCGTAGGCAATGGCGGCAGCGGTGGGTTCGTTGATGATTCTCAAAATATTT 289414 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 | || | ||| | | || ||||| || || || ||| || ||||| || || || Sbjct 289415 AATCCGGAAATGGCACCGGCGTCTTTAGTGGCCAATCTTTGAGAGTCGTTGAAATAAGCG 289474 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 || || || | || ||||| ||||| || || | || ||| || | |||| Sbjct 289475 GGAACGGTGATAACGGCGTCAGTGACGTTTTTGGACAAGTAGTTTTCGGCAACTCTTTTC 289534 Query 7778 ATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTA 7837 |||| || | |||||| | ||||| ||||| | || | ||| ||| || Sbjct 289535 ATTTCAGTCAAAACCATGGCGGAAATTTCTTCGGGGTGGAATTTTTTGAATTCGTTTTTG 289594 Query 7838 AAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCT 7897 || | || |||||||| || | | | ||| || | | ||| | | Sbjct 289595 TGTCTGACAACGATAATGGGTTTTTCGTTTTCGTCAGCTTCAACTTTGAAGGGCCAGTTT 289654 Query 7898 TTCATATCGTCTTGGACCTGTTG--GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCAT 7955 | || ||| | || || || | ||| | ||||||||||| | | || |||| Sbjct 289655 TCCAAATCTTTTTAGA--TGGCGGAGTCTTTGATTTTTCTTCCGATCAATCTTTTAGCAT 289712 Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 | ||||| ||||| ||||| |||| ||| || || || | || ||||| | | Sbjct 289713 CGAAAACGGTGTTCAAAGGGTTTTTGGCGACTTGATTTTTAGCAGAATCTCCGATTAATC 289772 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 ||| ||| ||| || || || ||||| || ||||| |||| || |||| || || | Sbjct 289773 TTTC-TTA--TTCGGTGAAGGCAACGTAAGAGGGGGTGGTTCTGTTACCTTAATCATTGG 289829 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 || ||||| || | ||||||| |||||| |||||||| || || || ||||| | || Sbjct 289830 GGATGATTTCAACTCTATCGTTTTACCAGACTCCGACGCAGGAGTAAGTGGTTCCAAGAT 289889 Query 8136 CAATACCGATTGC 8148 | || || || || Sbjct 289890 CGATTCCAATAGC 289902 >seq85 Length=240375 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 183341 TCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAATATTA 183400 ||||| || ||||| | ||||||||||| ||| ||| | |||||||| ||| Sbjct 33445 TCTTTTCCTCCCATATTTCTGGTACCAAATTGCCCATTAGGTAATAAAAAATTAATGTTA 33504 Query 183401 TTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTCACCG 183460 || || ||| ||||||| | || | | |||||| | |||||| ||||||||| Sbjct 33505 TTTGAGCCCATAAAATTTTAAGCCATACCAATAATTGTGGATTACAAAGACACTTCACCG 33564 Query 183461 TGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || ||||| | || || ||| ||||||||| | | ||||| ||||| || ||||| Sbjct 33565 TGATGATAAGCTGATTATTCAGAAACGTATCCAGATAATTATGCAACTTTTATTTC 33620 >seq268 Length=108487 Score = 82.4 bits (90), Expect = 1e-10 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGC 7665 ||||| || | || || || || ||||| || || || | ||||| ||| || || | Sbjct 91370 CCGTAAGCAAGGGCGGCAGCGGTGGGTTCGTTGATGATTCTTAAGAC-GTTAAGTCCGGA 91312 Query 7666 AATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725 || || | || ||||| || ||||||| ||| || ||||| || ||||| ||||| || Sbjct 91311 GATTTTTCCGGCGTCTTTAGTGGCTTGTCTTTGGGAGTCGTTGAAATAGGCGGGGACGGT 91252 Query 7726 TACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 ||||| |||| |||| | || || | ||| | ||| || | ||||||||||| Sbjct 91251 AACGACGGCGTTGTTGACGGTTTTTCCTAAATAAGCTTCGGCAGTTTCTTTCATTTT 91195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130513521920