Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq130 91.5 1e-13 >seq130 Length=530367 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 34748 ATCATT-TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTAT 34806 |||||| |||||| || || || || |||||||| | || |||||||| | || |||| Sbjct 9176 ATCATTATCCTCCTCTTAATCTTAAGACCAAGTGTAAGGTACTTTCTTTTTAGATATTAT 9117 Query 34807 AGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGT 34866 | || || | | ||| | | || || | | |||||||||||| |||| || || |||| Sbjct 9116 AATCAGATAAGGTTCTTCCGTCTTCTAATTATTTTCCGGCAAAAATTAATCTTTATTGGT 9057 Query 34867 CTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGG 34926 | | || | || || || || ||| || |||||| | | || || ||| || Sbjct 9056 CAGGGGGAATTCCTTCTTTATCTTAAATTTTGGCTTTGACATTTTCAATGGAATCAGAGG 8997 Query 34927 CCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| | || || |||||||| || | ||| || || || || | ||| Sbjct 8996 ATTCAACATCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTAACGAAAATTTACAT 8942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632460536064