Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq88 89.7 1e-12 >seq88 Length=166103 Score = 89.7 bits (98), Expect = 1e-12 Identities = 163/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 133895 ATTGATGGATTGAAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTT 133954 ||| || ||||||||||||||| ||||| || | |||||| | ||||||||| Sbjct 90235 ATTAATTAATTGAAAAATAATCCAGATTCCAGAAGACATATTTTCTGTGCATGGAACCCC 90176 Query 133955 GGTGAACTAGATAAAATGACTTTGCCACCATGTCATTGCTTTAG-TCAATTCTTCGTAAA 134013 ||| | ||||||| |||| || || ||||| || ||| | | |||| || || Sbjct 90175 TCTGACATCCCTAAAATGGCTTTACCTCCTTGTCA-TGTTTTGGCATAGTTCTATGTTAA 90117 Query 134014 TGACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTACC 134073 ||| || || ||||||||| || |||| || | |||||| | | ||||| || Sbjct 90116 TGATGGAAAATTATCATGTCTTTTATACTAAAGATCTTGTGATATGGGACTTGGAGTTCC 90057 Query 134074 ATTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGT 134129 || || |||||||| ||| ||| | || |||||||| || ||||||||| Sbjct 90056 CTTTAATATTGCTTCTTATGGGTTATTGACATGCATGTTAGCTTAAATTTGTGGGT 90001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147586165391424