Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq130 192 1e-43 seq167 183 5e-41 seq249 131 3e-25 seq129 111 3e-19 seq232 107 3e-18 >seq130 Length=530367 Score = 192 bits (212), Expect = 1e-43 Identities = 181/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || |||||||||||| | ||| | ||||| ||||||| ||||| Sbjct 8943 ATTCCTCCTCTTAATCTTAATACTAAATGGAGAGTGGATTCTTTTTAAATATTGTAATCG 8884 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | | || || |||| ||| ||||| ||||||||||| | ||||||||| Sbjct 8883 GATAAAGTTCTTCCATCTTCTAATTATTTTCCAGCGAAAATTAATCTTTATTGGTCAGGG 8824 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| |||| |||||| ||| ||||| |||| ||| || ||||| Sbjct 8823 GGAATTCCTTCTTTGTCTTAAATTTTAGCTTTGACATTTTCAATAGAATCAGAAGATTCA 8764 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || |||| |||||| ||||| |||||||| ||||||| ||| || | |||| Sbjct 8763 ACATCTAAAGTAATAGTTTTTCCAGTTAAGGTTTTAACGAAAATTTACATT 8713 Score = 190 bits (210), Expect = 4e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || |||||||| ||||| ||| ||||| | |||||||| || Sbjct 8715 ATTCCTCCTCTTAATCTCAATACTAAGTGTAAGGTACTTTCTTTTTAGATATTATAGTCG 8656 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | |||| ||||||| ||| ||||| ||||||||||| | ||||||||| Sbjct 8655 GATAAAGTTCTTCCGTCTTCCAATTATTTTCCAGCGAAAATTAATCTTTATTGGTCAGGG 8596 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||||| |||||| ||| ||||| || | ||| || ||||| Sbjct 8595 GGGATACCTTCTTTATCTTAAATTTTAGCTTTGACATTTTCAATGGAATCAGAAGATTCA 8536 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || |||| |||||||||||| |||||||| ||||| | ||| || | |||||| Sbjct 8535 ACGTCTAAAGTAATGGTTTTTCCAGTTAAGGTTTTGACGAAAATTTACATTTT 8483 Score = 183 bits (202), Expect = 5e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || |||||||||||| | ||| | ||||| ||||||| ||||| Sbjct 6834 ATTCCTCCTCTTAATCTTAATACTAAATGGAGAGTGGATTCTTTTTAAATATTGTAATCG 6893 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | | || || |||| ||| ||||| ||||||||||| | ||| ||||| Sbjct 6894 GATAAAGTTCTTCCATCTTCTAATTATTTTCCAGCGAAAATTAATCTTTATTGATCAGGG 6953 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| |||| |||||| ||| ||||| |||| ||| || ||||| Sbjct 6954 GGAATTCCTTCTTTGTCTTAAATTTTAGCTTTGACATTTTCAATAGAATCGGAAGATTCA 7013 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || |||| |||||| ||||| |||||||| ||||| | ||| || | |||| Sbjct 7014 ACATCTAAAGTAATAGTTTTTCCAGTTAAGGTTTTGACGAAAATTTACATT 7064 Score = 174 bits (192), Expect = 3e-38 Identities = 181/236 (77%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 |||| || || ||||| | || ||| || || ||||| ||| ||||| | ||||||| Sbjct 9175 TCATTAT-CCTCCTCTTAATCTTAAGACCAAGTGTAAGGTACTTTCTTTTTAGATATTAT 9117 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 |||| ||||| | || | |||| || |||| ||| || |||||||||||||| | ||||| Sbjct 9116 AATCAGATAAGGTTCTTCCGTCTTCTAATTATTTTCCGGCAAAAATTAATCTTTATTGGT 9057 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACG 172014 |||| || |||||||||||||||| ||||| ||| ||||| || | ||| || | Sbjct 9056 CAGGGGGAATTCCTTCTTTATCTTAAATTTTGGCTTTGACATTTTCAATGGAATCAGAGG 8997 Query 172015 ATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 |||| || |||| |||||| ||||| ||||| || ||||||| ||| || | |||| Sbjct 8996 ATTCAACATCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTAACGAAAATTTACATT 8941 Score = 170 bits (188), Expect = 3e-37 Identities = 180/236 (76%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 |||| || || ||||| | || ||| || || ||||| ||| ||||| | || |||| Sbjct 6374 TCATTAT-CCTCCTCTTAATCTTAAGACCAAGTGTAAGGTACTTTCTTTTTAGATGTTAT 6432 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 |||| ||||||| || | | || || |||| ||| ||||| ||||||||||| | ||| | Sbjct 6433 AATCAGATAAAGTTCTTCCATCTTCTAATTATTTTCCAGCGAAAATTAATCTTTATTGAT 6492 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACG 172014 |||| || ||||||||||| |||| |||||| ||| ||||| || | ||| || | Sbjct 6493 CAGGGGGAATTCCTTCTTTGTCTTAAATTTTAGCTTTAACATTTTCAATGGAATCAGAAG 6552 Query 172015 ATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 |||| || |||| |||||||||||| |||||||| ||||| | ||| || | |||| Sbjct 6553 ATTCAACGTCTAAAGTAATGGTTTTTCCAGTTAAGGTTTTGACGAAAATTTACATT 6608 Score = 168 bits (186), Expect = 1e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || ||||| || ||||| ||| ||||| | || |||||||| Sbjct 6606 ATTCCTCCTCTTAATCTCAATACCAAGTGTAAGGTACTTTCTTTTTAGATGTTATAATCA 6665 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | |||| || |||| ||| || |||||||||||||| | ||||||||| Sbjct 6666 GATAAAGTTCTTCCGTCTTCTAATTATTTTCCGGCAAAAATTAATCTTTATTGGTCAGGG 6725 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||||| |||||| ||| ||||| || | ||| || ||||| Sbjct 6726 GGGATACCTTCTTTATCTTAAATTTTAGCTTTAACATTTTCAATGGAATCAGAAGATTCA 6785 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || |||| ||||| ||||| || ||||| ||||||| ||| || | |||| Sbjct 6786 ACGTCTAAGGTAATAGTTTTTCCGGTTAAGGTTTTAACGAAAATTTACATT 6836 Score = 168 bits (186), Expect = 1e-36 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || ||| ||||| ||||| ||| ||||| | |||||||| || Sbjct 7062 ATTCCTCCTCTTAATCTTAAGACTAAGTGTAAGGTACTTTCTTTTTAGATATTATAGTCG 7121 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | |||| || |||| ||| ||||| ||||||||||| | ||||||||| Sbjct 7122 GATAAAGTTCTTCCGTCTTCTAATTATTTTCCAGCGAAAATTAATCTTTATTGGTCAGGG 7181 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||||| |||||| ||| || || || | ||| || ||||| Sbjct 7182 GGGATACCTTCTTTATCTTAAATTTTAGCTTTAACGTTTTCAATGGAATCGGATGATTCA 7241 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 || |||| ||||| ||||| || ||||| ||||||| ||| || | ||| || || Sbjct 7242 ACGTCTAAGGTAATAGTTTTTCCGGTTAAGGTTTTAACGAAAATTTACATATTTTT 7297 Score = 136 bits (150), Expect = 7e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 |||| ||||| | | ||||| || ||||| ||| ||||| |||| |||||||| | Sbjct 13863 TACCTCCTCTTAAACTTAATAACAAGTGTAAGGTACTTTCTTTTTAAATGTTATAATCGG 13804 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 |||||| || | |||| || |||| ||| ||||| ||||||||||| | ||||||||| | Sbjct 13803 ATAAAGTTCTTCCGTCTTCTAATTTTTTTCCAGCGAAAATTAATCTTTATTGGTCAGGGG 13744 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | || ||||||||||||| |||||| ||| || || || | ||| | || | | Sbjct 13743 GGATACCTTCTTTATCTTAAATTTTACCTTTAACGTTTTCAATGGAATCATATGAATTAA 13684 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATAT 172063 | || | ||| ||||| || ||||| ||||||| ||| || Sbjct 13683 AGTTTAAATAAATAGTTTTTCCGGTTAAGGTTTTAACGAAAAT 13641 Score = 129 bits (142), Expect = 1e-24 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 171857 TAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTC 171916 ||| ||||| | ||| ||| ||||| |||| |||||||| ||||||| || ||| || Sbjct 10889 TAACACTAAGTATAAGGTACTTTCTTTTTAAATGTTATAATCAGATAAAGTTCTTTCATC 10830 Query 171917 ATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATC 171976 || |||| ||| ||| | ||||||| ||| | ||| ||||| || |||||||||||||| Sbjct 10829 TTCTAATTATTTTCCATCTAAAATTATTCTTTATTGATCAGGGGGAATTCCTTCTTTATC 10770 Query 171977 TTGTATTTTATTTTTTACATTAGTTATAGTATC-TGACGATTCTACTTCTAGAGTAATGG 172035 || |||||| ||| ||| | |||||||| |||| ||| || |||| |||| Sbjct 10769 TTAAATTTTACCTTTGACAATTTCAATAGTATCATGAC-ATTAAACGTCTAAGGTAAATT 10711 Query 172036 TTTTACCAGTTAATGTTTTAATGAATAT 172063 |||| || |||| ||||| | ||| || Sbjct 10710 TTTTTCCCATTAAGGTTTTGACGAAAAT 10683 Score = 129 bits (142), Expect = 1e-24 Identities = 140/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 171854 TCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTC 171913 || ||| |||| | ||| ||| ||||| |||| |||||||| ||||| | || | | Sbjct 11579 TCATAAAACTAGTTTTAAGGTACTTTCTTTTTAAATGTTATAATCAGATAATGTTCTTCC 11520 Query 171914 GTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTT 171973 ||| || ||| ||| || |||||||| ||||| | ||||||||| || ||||||||||| Sbjct 11519 GTCTTCTAATGATTTTCCGGCAAAAATCAATCTTTATTGGTCAGGGGGAATTCCTTCTTT 11460 Query 171974 ATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAAT 172033 |||| |||||| ||||||||| |||| ||| || | || || | || |||||| Sbjct 11459 GTCTTAAATTTTAGCTTTTACATTTTCAATAGAATCAGATGGCTCCACATTTATAGTAAT 11400 Query 172034 GGTTTT 172039 |||||| Sbjct 11399 GGTTTT 11394 >seq167 Length=324310 Score = 183 bits (202), Expect = 5e-41 Identities = 184/238 (77%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||| | || ||| ||||||||||| || | ||||| |||| || ||||| Sbjct 152722 ATACCTCCTCTCAATCTTAAGACTAAATGTAAGGTGGATTCTTTTTAAATGTTGTAATCA 152663 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | |||| || |||| ||| ||||| ||||||||||| | ||||||||| Sbjct 152662 GATAAGGTTCTTCCGTCTTCTAATTATTTTCCAGCGAAAATTAATCTTTATTGGTCAGGG 152603 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| |||||| ||| || || |||| || || ||||| Sbjct 152602 GGGATTCCTTCTTTGTCTTGGATTTTAGCTTTGACGTTTTCAATAGAGTCAGAGGATTCG 152543 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTAT 172077 || || | ||| |||||||| || ||||| ||||||| ||| || | |||||| |||| Sbjct 152542 ACGTCCAAAGTGATGGTTTTTCCGGTTAAGGTTTTAACGAAGATTTACATTTT-TTAT 152486 Score = 176 bits (194), Expect = 8e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||| | || ||| ||||| |||||||| | ||||| | |||||||| || Sbjct 152950 ATACCTCCTCTCAATCTTAAAACTAAGTGTAAAGTGGATTCTTTTTAGATATTATAGTCA 152891 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | |||| || |||| ||| || || ||||||||||| | ||||||||| Sbjct 152890 GATAAAGTTCTTCCGTCTTCTAATTATTTTCCGGCGAAAATTAATCTTTATTGGTCAGGG 152831 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||||||||||| |||||| ||| ||||| || | || || ||||| Sbjct 152830 GGAATTCCTTCTTTATCTTAAATTTTAGCTTTAACATTTTCAATGGAGTCAGAAGATTCA 152771 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | |||||| ||||| || ||||| ||||||| ||| || | ||| Sbjct 152770 ACATCCAAAGTAATAGTTTTTCCGGTTAAAGTTTTAACGAAAATTTACAT 152721 Score = 158 bits (174), Expect = 2e-33 Identities = 173/229 (76%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 171826 TTTTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAG 171885 |||| | |||| ||| || ||||| | || ||| ||||| |||||||| | ||||| Sbjct 153191 TTTTGTGGTTCA-AATTCCTCCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTT 153133 Query 171886 AAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATC 171945 | || ||||| || ||||||| || | |||| || |||| ||| || || |||||||||| Sbjct 153132 AGATGTTATAGTCAGATAAAGTTCTTCCGTCTTCTAATTATTTTCCGGCGAAAATTAATC 153073 Query 171946 TCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAG 172005 | | ||| || || || ||||||||||| |||| |||||| ||| ||||| |||| Sbjct 153072 TTTATTGATCGGGGGGGATTCCTTCTTTGTCTTAAATTTTAGCTTTAACATTTTCAATAG 153013 Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 || || ||||| || || | ||| |||||||| |||||||| ||||| Sbjct 153012 AGTCAGAAGATTCAACGTCCAAAGTGATGGTTTTTCCAGTTAAAGTTTT 152964 >seq249 Length=567749 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || ||||| | || ||| ||||| ||||| || | ||||| | ||||| ||||| ||| Sbjct 154909 CCTCCTCTTAATCTTAAAACTAAGTGTAAGGTGGATTCTTTTTAGATATTGTAATCAGAT 154850 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 |||| || | | || || |||| ||| || || || |||||||| | ||| ||||| || Sbjct 154849 AAAGTTCTTCCATCTTCTAATTATTTTCCGGCGAAGATTAATCTTTATTGATCAGGGGGG 154790 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||||||||||| ||||| ||| || || |||| ||| || | ||| || Sbjct 154789 ATACCTTCTTTATCTTAGATTTTGGCTTTGACGTTTTCGATAGAATCGGAAGCTTCGACG 154730 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || ||||| || || | ||||| | ||| || | |||||| Sbjct 154729 TCAAGGGTGATAGTTTTCCCGGTAAGGGTTTTGACGAAAATTTACATTTT 154680 >seq129 Length=365655 Score = 111 bits (122), Expect = 3e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || |||||||||| || || || || ||||| ||||| | || ||||| | | | Sbjct 253091 CCCCCTCTAAGTCTCAAAACCAAGTGCAAAGTGCTTTCTTTTTATATTTTATATTAGGCT 253150 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 ||| || |||||| ||||| | || || |||||||| | || | ||||||||| || Sbjct 253151 AAACTTCCTTCGTCTTCCAACTATTGTCCCGCAAAAATAAGCCTTTATTGGTCAGGCGGA 253210 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTAC-ATTAGTTATAGTATCTGACGATTCTAC 172021 ||||||||||| || ||||| ||| |||| | | ||| || ||||| | |||||| Sbjct 253211 ATTCCTTCTTTGCTCTGAATTTT-TTTCTTACAAATTTCTATTGTCTCTGAAGCTTCTAC 253269 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT 172071 | || || || ||||| || ||||| ||||| | | | || | ||||| Sbjct 253270 GTAGAGGGTGATTGTTTTTCCCGTTAAAGTTTTTACGTAAATTTCCATTT 253319 >seq232 Length=78669 Score = 107 bits (118), Expect = 3e-18 Identities = 151/207 (73%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 38991 TCACAATTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatt 39050 ||| |||||||||| | |||| | | ||||| || ||| ||||||||| ||||| ||| Sbjct 21854 TCAGAATTCATACCAATCAATTCACAAGGTAAAGCTTCAATAATAAATTCCTTTTCAATT 21913 Query 39051 tctacagcttgtttaattatcataattatattattttttgataatttatattta-atatg 39109 || ||||||| |||| | | | | || || | |||| | | || | ||| | ||| Sbjct 21914 TCAACAGCTTCAGTAATAACCTGAGTAAT-TTGCTCTTTGCTCAATTTTCTTTCTAAATG 21972 Query 39110 attcgcatataGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTC 39169 || | |||| |||||| || ||||| || |||||||||||||| ||||| || || || Sbjct 21973 -TTAG--TATAATAAACAAGCGAAATCAGTGTGTAAACCTTCGTCTCTAGAAATTAACTC 22029 Query 39170 ATTACTAAAAGTTAATCCTGGCATTAA 39196 ||| ||||| | ||| ||||| || Sbjct 22030 ATTTGAGAAAGTAAGTCCGGGCATCAA 22056 Score = 93.3 bits (102), Expect = 8e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 38846 AACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAATTCATAAAATCAAA 38905 |||| ||||||| || || || |||||||||| ||| || | || ||| |||| || Sbjct 21562 AACTCTTTTTTCAAAGAAATTAGTTTTTCCTTATAAACTAATCATATCCATCCAATCGAA 21621 Query 38906 TGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAATAATCTATCGGCCAC 38965 |||||||| |||||||||||| || ||| ||| | ||||||||||| || || Sbjct 21622 AGGATTTTTTACATTATAATATTTAGGAGCTCCCAAAACAAACAATAATCTATCAGCGAC 21681 Query 38966 AAATTCAACATATT 38979 |||||||| ||||| Sbjct 21682 AAATTCAATATATT 21695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905132741510400