Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq141 102 1e-16 >seq141 Length=555024 Score = 102 bits (112), Expect = 1e-16 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 68722 AATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 68781 ||||| |||||||| ||||| | ||| || | |||||| || ||||||| | ||||||| Sbjct 67549 AATTCTCCAGATAATACTCTTCTAGTATATAAATTACTTGTTAATGGTTCAAAAGATTCA 67608 Query 68782 TTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTT 68841 ||||||||| ||||||| || ||||| ||||||||||| || | ||| |||| Sbjct 67609 GTATTTCCCATAATTTGACTTGTACTAGCAGTGGGCATAGGTGCAACTAGCAAAGAATTT 67668 Query 68842 CTAAGACCATGTGTTATGATTTTATCTTTTA 68872 || | ||||| || | |||| || |||| Sbjct 67669 CTCAAACCATTAATTTTTATTTACTCCTTTA 67699 Score = 102 bits (112), Expect = 1e-16 Identities = 179/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 69929 TACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTA 69988 |||| || || ||||| ||| ||| | || | ||||| ||||||| | | | Sbjct 69088 TACCTTCAATACTATCTTCTTACATTTAAACTAAGAAACAAGAGGACATTTAAGGTTTAG 69147 Query 69989 TAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGAT 70048 ||||| | |||||||||||||||| ||| ||||| |||||||||| | | || | Sbjct 69148 GTGTTCCAGAGTTAAATAATGTAGGAGTTGCATGAGTAAACCATTTTTGACTCATCAACT 69207 Query 70049 TGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCA 70108 ||| |||| || | ||||| ||| | |||||||||| | || | ||| | Sbjct 69208 CGTAAGTTTTAAACACATTTTCTAAATCATTTTTGTGAATTCCTAAAGAAACTCTCATTA 69267 Query 70109 ACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 ||||| | ||||| || || |||| | | ||| | | || || |||||||||| Sbjct 69268 TCATATATTAAGGTCTCTCGACAATTTTTTGGTGAATTCTTAGCAAATAAGATTTTTCCA 69327 Query 70169 GAGTTTTAAACCCAAAATAGT 70189 |||||||||||||||| ||| Sbjct 69328 AAGTTTTAAACCCAAAAAAGT 69348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906327128320