Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq130 96.9 3e-15 >seq130 Length=530367 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||||| || | || | ||| |||||||||| |||||||||||||| Sbjct 8940 CCTCCTCTTAATCTTAATACTAAATGGAGAGTGGATTCTTTTTAAATATTGTAATCGGAT 8881 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | |||||| |||| ||| || || | || | |||| |||||| ||| Sbjct 8880 AAAGTTCTTCCATCTTCTAATTATTTTCCAGCGAAAATTAATCTTTATTGGTCAGGGGGA 8821 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||||||||| |||||| ||| |||| | | | || | || Sbjct 8820 ATTCCTTCTTTGTCTTAAATTTTAGCTTTGACATTTTCAATAGAATCAGAAGATTCAACA 8761 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | ||||||||||| || || || ||||||| ||||||| |||| Sbjct 8760 TCTAAAGTAATAGTTTTTCCAGTTAAGGTTTTAACGAAAATTTACATT 8713 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||||| || | || | ||| |||||||||| |||||||||||||| Sbjct 6837 CCTCCTCTTAATCTTAATACTAAATGGAGAGTGGATTCTTTTTAAATATTGTAATCGGAT 6896 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | |||||| |||| ||| || || | || | |||| ||| || ||| Sbjct 6897 AAAGTTCTTCCATCTTCTAATTATTTTCCAGCGAAAATTAATCTTTATTGATCAGGGGGA 6956 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||||||||| |||||| ||| |||| | | | || | || Sbjct 6957 ATTCCTTCTTTGTCTTAAATTTTAGCTTTGACATTTTCAATAGAATCGGAAGATTCAACA 7016 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | ||||||||||| || || || ||||| | ||||||| |||| Sbjct 7017 TCTAAAGTAATAGTTTTTCCAGTTAAGGTTTTGACGAAAATTTACATT 7064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409659362090592