Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocohnilembus_20persalinus_20[genbank_20GCA_5F001447515.1_202015 -11-24] 288 sequences; 55,455,357 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq249 129 1e-24 seq167 125 1e-23 >seq249 Length=567749 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 ||||| ||| |||||||| ||| ||||| |||| | || | ||||| |||| || | Sbjct 154885 TGTAAGGTGGATTCTTTTTAGATATTGTAATCAGATAAAGTTCTTCCATCTTCTAATTAT 154826 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || ||||| ||||| || | || ||| ||| || ||||| || || |||| ||| || Sbjct 154825 TTTCCGGCGAAGATTAATCTTTATTGATCAGGGGGGATACCTTCTTTATCTTAGATTTTG 154766 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| ||| | ||||||| || ||||||||||| || || ||||| || || || || Sbjct 154765 GCTTTGACGTTTTCGATAGAATCGGAAGCTTCGACGTCAAGGGTGATAGTTTTCCCGGTA 154706 Query 283077 AAAGTCTTAACGAATATCTGCATTTTCAT 283105 | || || ||||| || | |||||| || Sbjct 154705 AGGGTTTTGACGAAAATTTACATTTTTAT 154677 >seq167 Length=324310 Score = 125 bits (138), Expect = 1e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 |||||| ||| |||||||| |||||||| |||| | || | || || |||| || Sbjct 152696 ATGTAAGGTGGATTCTTTTTAAATGTTGTAATCAGATAAGGTTCTTCCGTCTTCTAATTA 152637 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||| || || || || || | || ||||||| || || || || ||||||||||| || Sbjct 152636 TTTTCCAGCGAAAATTAATCTTTATTGGTCAGGGGGGATTCCTTCTTTGTCTTGGATTTT 152577 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||| | || |||| ||| || | |||||| || | |||||| || || || || Sbjct 152576 AGCTTTGACGTTTTCAATAGAGTCAGAGGATTCGACGTCCAAAGTGATGGTTTTTCCGGT 152517 Query 283076 CAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||| || | |||||| Sbjct 152516 TAAGGTTTTAACGAAGATTTACATTTT 152490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735337532352