Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq19 84.2 3e-11 >seq19 Length=2460983 Score = 84.2 bits (92), Expect = 3e-11 Identities = 154/225 (68%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 145689 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTC 145748 || |||||| || |||||||||| || |||| || ||| | ||| | | | | Sbjct 2387843 CTGCACGTGATTCGAATAGACGTGCGTGTTTCCCATGAAGTGAACGAATTTCTTCGCTTT 2387784 Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 | || |||| |||||||||||| ||||||| ||||| ||||| || || || Sbjct 2387783 CAATCCGGTGATGTGGGCGACCATCAGTGTCAGCAACGAGTAAGAAGCTATATTAAACGG 2387724 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT---CCCCGCC 145865 || ||||| || | ||| | ||||||||||| || ||| | ||||| || || | Sbjct 2387723 GACGCCCAGTCCAACGTCGCAAGAGCGCTGGTAGAGTATGCAAGTGAGCTGCGCCTCGTC 2387664 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 | || | ||||| ||| ||||| || |||||||| ||||| Sbjct 2387663 GTCAACACAAAACTGCGCCAGCAGGTGACACGGCGGCAGCGCCAT 2387619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590070375538840