Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq19 114 2e-21 >seq19 Length=2460983 Score = 114 bits (126), Expect = 2e-21 Identities = 179/256 (70%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || |||||||| || || ||||| |||||||||||||| | |||| |||||||| || Sbjct 477775 CGCGATAACATTCAGGGCATCACAAAGCCAGCTATCCGCAGGTTGGCGCGTCGTGGAGGC 477834 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || | | || || ||| | |||||||| ||||||| ||| | ||| | ||||| Sbjct 477835 GTGAAAAGAATTTCGGGCTTGATTTATGAAGAAATTCGTGGTGTACTCAAGGTGTTCCTT 477894 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| | | ||| | || || | || || || ||||| | |||||||| || Sbjct 477895 GAGAACATCATCAAGGACTCTGTAACGTACACAGAACACGCACGCAGAAAGACTGTGACG 477954 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 ||||||| || ||||| | |||| || |||||| | | |||| ||||| || || Sbjct 477955 GCCATGGACATTGTCTACTCCCTGAAGCGCCAAGGCAGAACCCTTTACGGTTTCGGTGGT 478014 Query 16697 TAATCTTCTAATCAAA 16712 ||| | || | || || Sbjct 478015 TAAACATCCAGTCGAA 478030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074403638603