Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq12 91.5 2e-13 >seq12 Length=3345923 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 203842 GTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTC-TCAGATAGTACATGCCGG 203900 ||| ||||| |||| ||| |||| | | || | ||||| || |||| ||||||| || | Sbjct 1180475 GTCAACCGTAAACTTAATCGCGTCCGCCGCTG-CCTGCGTCCTCAGGTAGTACAGTCCCG 1180533 Query 203901 TCTTTAGGCC-CTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 |||||||||| ||| ||| ||||| | ||||| | || || ||| | | ||| Sbjct 1180534 TCTTTAGGCCAGCTCT-CCAGCCGTAGAAATGCATTGTGGAAAGCTTGGCGTAGGTAGGG 1180592 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019 | | ||| ||||||||||| |||||| ||||||||| ||||||| | ||| | || Sbjct 1180593 TTGATCATATGAATGTTCAGCGACTGGGATTGGTCGATATAAGGCGCTCTGTCTACAGCG 1180652 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065 | | | ||| |||| ||||||||||| || ||| ||| Sbjct 1180653 AGGTCTAGAATCACACGCTGCTTGATCTCCCACACAGTTTTGTACA 1180698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795146542747760