Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq12 89.7 1e-12 >seq12 Length=3345923 Score = 89.7 bits (98), Expect = 1e-12 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081 ||| || |||| || | |||||| ||||| || ||||||| || |||||||||||| Sbjct 1182030 GTTCTCGCTGACTCTTTCCATGAAAAGGTCTGGAATCCACAAAGCACCAAAGAGATCTCT 1182089 Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141 | | | |||| || ||||| ||||||||| | || | ||| ||||| ||||| Sbjct 1182090 CGCTCTCCGCTCTTCTTTGCCGTGGTTTTTCCTTAAGTCTAGAAAGTCAAATATGTCGTA 1182149 Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGC-GCCGGGTCGCTTGTTGCCACCCTGATCCA 222200 ||||| ||||| ||||| || |||| ||| || || ||| || |||||||||| Sbjct 1182150 ATGCCAAGGCTCGAGATACACAGCCA-AGCTTCCTTTTCTCTTTCCACCTCCCTGATCCA 1182208 Query 222201 C 222201 | Sbjct 1182209 C 1182209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928834687202240