Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 1e-13 >seq12 Length=3345923 Score = 95.1 bits (104), Expect = 1e-13 Identities = 111/147 (76%), Gaps = 6/147 (4%) Strand=Plus/Minus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 || || |||||||| |||||| ||||||||||| |||| || || |||||||||||| Sbjct 982843 TATTCTCCCACGCGTTTCTCGAAGAAGTTGGTCTTCCCCTGCAGAGATATCAACTCCATC 982784 Query 868760 CACGGGAACGGGTTGGGCGTCTTGT-AGTGCTTTTCGCA--TCCGAGCGACGCGAGCAGG 868816 || || ||||| |||| || | | ||||| | ||| ||||||| ||||| Sbjct 982783 CAATCAAATGGGTT---CGTCGAGTAAAAGACTTTCGGAACTCCCAGCGACGTTAGCAGT 982727 Query 868817 CGGTCGGCGACAAACTCGATGTACTGG 868843 || || || |||||||||||||||||| Sbjct 982726 CGATCCGCCACAAACTCGATGTACTGG 982700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107067721661107