Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 1e-15 >seq19 Length=2460983 Score = 98.7 bits (108), Expect = 1e-15 Identities = 157/225 (70%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 146925 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTT 146984 || |||||| || |||||||||| || |||| | ||| || || | | || || Sbjct 2387843 CTGCACGTGATTCGAATAGACGTGCGTGTTTCCCATGAAGTGAACGAATTTCTTCGCTTT 2387784 Query 146985 AAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGG 147044 | ||||| | |||||| ||||| || |||| |||||| ||||| || || || Sbjct 2387783 CAATCCGGTGATGTGGGCGACCATCAGTGTCAGCAACGAGTAAGAAGCTATATTAAACGG 2387724 Query 147045 GACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCT---CCCCGTC 147101 ||| ||||| || | ||| | || | |||||| || ||| | ||||| || |||| Sbjct 2387723 GACGCCCAGTCCAACGTCGCAAGAGCGCTGGTAGAGTATGCAAGTGAGCTGCGCCTCGTC 2387664 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 | | || ||||||| ||| | ||| ||||||||||||||||| Sbjct 2387663 GTCAACACAAAACTGCGCCAGCAGGTGACACGGCGGCAGCGCCAT 2387619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583481647274400