Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 4e-14 >seq7 Length=4216856 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || || || | ||| |||||||| | ||||| || || ||||| |||||||| | | Sbjct 3942898 CCACCTCGTAATCTCAACACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCGAT 3942839 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 |||| || | ||||| |||||||| || || | || || | |||||| || || || Sbjct 3942838 AGTGTTCTGC-CATCTTCCAGCTGTTTCCCTGCAAAGATCAGCCTCTGTTGGTCAGGAGG 3942780 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || |||||||| || || |||| | || | || || | | || || Sbjct 3942779 GATGCCTTCTTTATCTTGAATTTTAGCCTTCACATTCTCGATCGTATCAGACGGCTCTAC 3942720 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||||| || || | ||| || || || ||||||||||| |||||||| Sbjct 3942719 TTCTAGTGTGATGGTTTTTCCTGTAAGGGTTTTCACAAAAATTTGCAT 3942672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929889188552