Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 3e-14 >seq7 Length=4216856 Score = 93.3 bits (102), Expect = 3e-14 Identities = 114/154 (74%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 || ||| |||||| ||||| |||||| ||||| || || ||||| | |||||| Sbjct 3942291 GTGAAAGCAAAAATTCAGGACAAGGAAGGTATTCCGCCAGACCAACAACGTCTTATTTTT 3942350 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGA--GA 27982 || ||||| ||| |||| |||| | | | ||||||||||||||||| || ||||| | Sbjct 3942351 GCAGGAAAGCAACTGGAGGACGGAAGAACGTTGTCCGATTACAACATTCAGAAAGAATCA 3942410 Query 27983 GCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||| || ||||| | || |||||||| || Sbjct 3942411 ACACTT--CACTTGGTACTTCGATTGCGTGGAGG 3942442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355858622409417